Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 BX510359.4-201ENST00000423750 193 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 DNAJC19P4-201ENST00000440115 345 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 AC007969.2-201ENST00000441891 191 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 AC074344.1-201ENST00000512823 224 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 RNU2-69P-201ENST00000516061 100 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 RNU2-53P-201ENST00000516257 147 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 RNA5SP137-201ENST00000516833 135 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 MTND2P38-201ENST00000522536 667 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 AGGF1P4-201ENST00000568249 801 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 MIR3126-201ENST00000577443 74 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 RPL30P11-203ENST00000598995 310 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 AC073410.2-201ENST00000603240 332 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 RN7SKP299-201ENST00000606679 301 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 HAUS6P2-201ENST00000433254 2404 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
SMARCB1Q12824 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMARCB1Q12824 ZNF702P-202ENST00000434269 1966 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-37P-201ENST00000362692 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-552P-201ENST00000362869 119 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-11P-201ENST00000364234 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 Y_RNA.324-201ENST00000365165 102 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-25P-201ENST00000383873 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-1-201ENST00000383898 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 SNORD116-9-201ENST00000384000 95 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-48P-201ENST00000384161 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-36P-201ENST00000384172 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-4P-201ENST00000384205 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-5P-201ENST00000384238 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 SNORD116-3-201ENST00000384287 95 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-3P-201ENST00000384314 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-16P-201ENST00000384385 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 SNORD116-7-201ENST00000384404 95 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 SNORD116-5-201ENST00000384462 95 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-15P-201ENST00000384534 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-2-201ENST00000384627 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-29P-201ENST00000384637 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-9-201ENST00000384776 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-33P-201ENST00000384793 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-903P-201ENST00000391270 109 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMARCB1Q12824 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU2-63P-201ENST00000410792 194 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU4-46P-201ENST00000410818 138 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 MTCYBP8-201ENST00000422855 651 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC096920.1-201ENST00000423991 241 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 AL161788.1-201ENST00000441805 169 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC117503.1-201ENST00000472241 394 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RPL30P12-201ENST00000474666 353 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 AL121594.1-201ENST00000475906 575 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC104136.1-201ENST00000512969 394 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 PSMA3P-201ENST00000555485 635 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.69□□□□□ -2.14
SMARCB1Q12824 AC068790.2-201ENST00000602601 557 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 RNU6-6P-201ENST00000606623 107 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 AL159153.1-201ENST00000619688 317 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 MTND4P23-201ENST00000447723 1363 ntBASIC1.69□□□□□ -2.14
SMARCB1Q12824 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SMARCB1Q12824 RNU6-1103P-201ENST00000384150 107 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 RNU6-1119P-201ENST00000384349 108 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 SNORD70.1-201ENST00000391007 85 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 RNU2-23P-201ENST00000410545 195 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 RNU2-48P-201ENST00000410694 191 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC138623.1-201ENST00000418060 216 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 AL353752.1-201ENST00000454946 260 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 SCARNA18-201ENST00000459004 134 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 CCDC34P1-201ENST00000507441 517 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC091133.4-201ENST00000511142 308 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 SNORA25.17-201ENST00000517184 124 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AP005639.2-201ENST00000527592 928 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 MTND1P15-201ENST00000579262 949 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC103987.3-201ENST00000582071 292 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC243960.4-201ENST00000600532 288 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC078795.2-201ENST00000602835 1252 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC002044.1-201ENST00000606707 158 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC096772.1-201ENST00000609146 564 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AL512598.1-201ENST00000610158 273 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 AC104073.3-201ENST00000610942 955 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 uc_338.15-201ENST00000615470 191 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 MIR5739-201ENST00000619803 80 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms