Protein–RNA interactions for Protein: Q08043

ACTN3, Alpha-actinin-3, humanhuman

Predicted RBP Predictions only

Length 901 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3Q08043 HMGN2P5-201ENST00000436882 273 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.02□□□□□ -2.09
ACTN3Q08043 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.02□□□□□ -2.09
ACTN3Q08043 PPP1R2P5-201ENST00000457256 603 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 AC009646.1-201ENST00000510455 318 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 RN7SKP219-201ENST00000516825 296 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 AC022880.1-201ENST00000534017 973 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.02□□□□□ -2.09
ACTN3Q08043 MIR4528-201ENST00000577763 90 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.02□□□□□ -2.09
ACTN3Q08043 Z99497.2-201ENST00000603634 310 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 U2.17-201ENST00000611454 95 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ACTN3Q08043 MIR1248-201ENST00000629190 106 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ACTN3Q08043 SNORD98-201ENST00000636377 67 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 MIR219B-201ENST00000637023 88 ntBASIC2.02□□□□□ -2.09
ACTN3Q08043 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ACTN3Q08043 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
ACTN3Q08043 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 RNU6-43P-201ENST00000384302 107 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 RNU6-903P-201ENST00000391270 109 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 UBE2V1P4-201ENST00000425374 344 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AC010975.2-201ENST00000427781 588 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.01□□□□□ -2.09
ACTN3Q08043 AL031667.1-201ENST00000440222 725 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.01□□□□□ -2.09
ACTN3Q08043 RNU6-956P-201ENST00000458868 103 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 RNU7-167P-201ENST00000459160 62 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.01□□□□□ -2.09
ACTN3Q08043 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.01□□□□□ -2.09
ACTN3Q08043 AP000873.5-201ENST00000533906 236 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.01□□□□□ -2.09
ACTN3Q08043 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.01□□□□□ -2.09
ACTN3Q08043 BNIP3P25-201ENST00000596023 559 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AL078605.1-201ENST00000603529 500 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AC107304.1-201ENST00000604229 296 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 AC002044.1-201ENST00000606707 158 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
ACTN3Q08043 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ACTN3Q08043 RNU6-266P-201ENST00000364225 107 ntBASIC2□□□□□ -2.09
ACTN3Q08043 SNORD32B-201ENST00000364460 84 ntBASIC2□□□□□ -2.09
ACTN3Q08043 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
ACTN3Q08043 RN7SKP61-201ENST00000410642 295 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2□□□□□ -2.09
ACTN3Q08043 AL117339.3-201ENST00000418733 162 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2□□□□□ -2.09
ACTN3Q08043 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2□□□□□ -2.09
ACTN3Q08043 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2□□□□□ -2.09
ACTN3Q08043 USP9YP29-201ENST00000445112 563 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AL031274.1-201ENST00000450334 232 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2□□□□□ -2.09
ACTN3Q08043 RNU7-63P-201ENST00000459054 62 ntBASIC2□□□□□ -2.09
ACTN3Q08043 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2□□□□□ -2.09
ACTN3Q08043 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2□□□□□ -2.09
ACTN3Q08043 AP005639.2-201ENST00000527592 928 ntBASIC2□□□□□ -2.09
ACTN3Q08043 MIR3122-201ENST00000577243 73 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC104984.5-201ENST00000586878 94 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC123912.5-201ENST00000605470 343 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
ACTN3Q08043 RMST_6.1-201ENST00000611980 203 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC241585.2-209ENST00000638217 143 ntBASIC2□□□□□ -2.09
ACTN3Q08043 AC092268.1-201ENST00000342691 405 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU4-15P-201ENST00000362613 141 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU6-552P-201ENST00000362869 119 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU6-428P-201ENST00000362942 107 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU6-348P-201ENST00000384386 107 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU6-692P-201ENST00000384496 107 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU6-1106P-201ENST00000390845 107 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 POLHP1-201ENST00000411806 470 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ACTN3Q08043 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.99□□□□□ -2.09
ACTN3Q08043 AL590135.1-201ENST00000422215 156 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC019205.3-201ENST00000424573 156 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC073464.1-201ENST00000429823 534 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTN3Q08043 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.99□□□□□ -2.09
ACTN3Q08043 AC016700.2-201ENST00000446011 156 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 SNRPGP7-201ENST00000469016 106 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC015911.1-201ENST00000495111 156 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC145146.1-201ENST00000496370 254 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AK3P2-201ENST00000507976 429 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTN3Q08043 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ACTN3Q08043 AP005660.1-201ENST00000522972 293 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AGGF1P4-201ENST00000568249 801 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC073648.5-201ENST00000603502 305 ntBASIC1.99□□□□□ -2.09
ACTN3Q08043 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.99□□□□□ -2.09
ACTN3Q08043 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.99□□□□□ -2.09
ACTN3Q08043 RNU6-26P-201ENST00000383985 107 ntBASIC1.98□□□□□ -2.09
ACTN3Q08043 RNU6-1103P-201ENST00000384150 107 ntBASIC1.98□□□□□ -2.09
ACTN3Q08043 RNU6-160P-201ENST00000384591 107 ntBASIC1.98□□□□□ -2.09
ACTN3Q08043 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.98□□□□□ -2.09
ACTN3Q08043 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.98□□□□□ -2.09
ACTN3Q08043 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms