Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.11□□□□□ -2.07
SCN1BQ07699 AC243972.3-201ENST00000539655 198 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 ZNF658B-202ENST00000615961 3375 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCN1BQ07699 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCN1BQ07699 RNU4-24P-201ENST00000364565 139 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 SNORA36A-201ENST00000384221 132 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AL512604.1-201ENST00000404812 257 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 TIMM9P3-201ENST00000428659 274 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN1BQ07699 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN1BQ07699 MTND3P16-201ENST00000452205 344 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 PMCHL2-203ENST00000457791 237 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 RNU6-1208P-201ENST00000459588 107 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 Y_RNA.704-201ENST00000516851 102 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AC087854.1-201ENST00000519706 414 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN1BQ07699 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.1□□□□□ -2.07
SCN1BQ07699 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN1BQ07699 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN1BQ07699 AL078605.1-201ENST00000603529 500 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AC080013.6-201ENST00000606185 215 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 AC064836.2-201ENST00000609491 462 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN1BQ07699 SDR42E1P4-201ENST00000620894 481 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 U4.3-201ENST00000621047 82 ntBASIC2.1□□□□□ -2.07
SCN1BQ07699 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
SCN1BQ07699 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SCN1BQ07699 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.07
SCN1BQ07699 MTND4P1-201ENST00000457501 1466 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN1BQ07699 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 RNU6-1068P-201ENST00000410958 103 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 AC096664.2-201ENST00000411843 406 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SCN1BQ07699 AC016907.1-201ENST00000419483 435 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 AC063976.3-201ENST00000426849 329 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.09□□□□□ -2.07
SCN1BQ07699 DLGAP5P1-201ENST00000430307 464 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN1BQ07699 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN1BQ07699 MIR5692C1-201ENST00000585309 91 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 AC025754.2-201ENST00000606491 432 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 AC092954.2-201ENST00000609103 430 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.09□□□□□ -2.07
SCN1BQ07699 SNORA43.4-201ENST00000629559 138 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 AL450472.1-202ENST00000637286 180 ntBASIC2.09□□□□□ -2.07
SCN1BQ07699 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SCN1BQ07699 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SCN1BQ07699 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SCN1BQ07699 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SCN1BQ07699 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 AC131280.1-202ENST00000624067 4211 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN1BQ07699 SNORA5B-201ENST00000363786 132 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RNU6-1164P-201ENST00000364428 107 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 Y_RNA.372-201ENST00000365599 102 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 MIR514A2-201ENST00000385131 88 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 MIR514A3-201ENST00000385132 88 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 MTCYBP2-201ENST00000407745 171 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RN7SKP284-201ENST00000411002 343 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN1BQ07699 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 AL353689.1-201ENST00000438895 199 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN1BQ07699 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN1BQ07699 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN1BQ07699 AC091885.1-201ENST00000506658 268 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN1BQ07699 RN7SKP24-201ENST00000515888 284 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RNU6-612P-201ENST00000516909 102 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RNA5SP490-201ENST00000517141 136 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 AC027807.1-201ENST00000559921 996 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 AC109446.1-201ENST00000566172 220 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 MIR4319-201ENST00000577285 85 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 MIR3923-201ENST00000579521 83 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 SNORD53-201ENST00000579969 78 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN1BQ07699 Z98751.3-201ENST00000604447 521 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 AC067747.1-201ENST00000608026 250 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCN1BQ07699 MTND4P23-201ENST00000447723 1363 ntBASIC2.08□□□□□ -2.08
SCN1BQ07699 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SCN1BQ07699 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN1BQ07699 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
SCN1BQ07699 AC009541.1-201ENST00000438279 2662 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 Y_RNA.99-201ENST00000363138 105 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 Y_RNA.231-201ENST00000364358 102 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 Y_RNA.517-201ENST00000384551 106 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 MIR483-201ENST00000385070 76 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 MIR27B-201ENST00000385129 97 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 RNU11-3P-201ENST00000391111 133 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms