Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL451064.1-201ENST00000607718 471 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AC040896.1-201ENST00000613819 479 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AC083806.3-201ENST00000614016 455 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AL359740.1-201ENST00000624340 592 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 RNU6-862P-201ENST00000362804 105 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 RNU6-438P-201ENST00000365561 103 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 MIR515-2-201ENST00000384883 83 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 MIR515-1-201ENST00000384884 83 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 RNU4-22P-201ENST00000411058 166 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.68□□□□□ -2.3
H3F3AP84243 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 snoU13.27-201ENST00000459278 104 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.68□□□□□ -2.3
H3F3AP84243 AC021146.8-201ENST00000507455 733 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.68□□□□□ -2.3
H3F3AP84243 AC079395.1-201ENST00000510981 262 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 AP003049.1-201ENST00000529418 457 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.68□□□□□ -2.3
H3F3AP84243 AC009712.1-201ENST00000564938 316 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 FAM106DP-201ENST00000586416 501 ntBASIC0.68□□□□□ -2.3
H3F3AP84243 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
H3F3AP84243 Y_RNA.191-201ENST00000363972 113 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 RNU6-1019P-201ENST00000364424 107 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 RNU5E-6P-201ENST00000365574 115 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 MIR499A-201ENST00000384903 122 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 RNU2-62P-201ENST00000410868 191 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.67□□□□□ -2.3
H3F3AP84243 RPS26P45-201ENST00000471748 340 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.67□□□□□ -2.3
H3F3AP84243 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.67□□□□□ -2.3
H3F3AP84243 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.67□□□□□ -2.3
H3F3AP84243 MTATP6P3-201ENST00000581686 676 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 MIR4452-201ENST00000583004 71 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 BNIP3P8-201ENST00000597863 560 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 AC107304.1-201ENST00000604229 296 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.67□□□□□ -2.3
H3F3AP84243 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
H3F3AP84243 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.67□□□□□ -2.3
H3F3AP84243 AL159152.1-201ENST00000635019 2587 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 SNORA63D-201ENST00000364359 132 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 RNU6-1179P-201ENST00000384667 107 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 AC010099.3-201ENST00000423896 409 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 RPL23AP30-201ENST00000432419 501 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 ATP5J2P3-201ENST00000451550 258 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
H3F3AP84243 MTCO3P28-201ENST00000513351 515 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.66□□□□□ -2.3
H3F3AP84243 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.66□□□□□ -2.3
H3F3AP84243 MIR3146-201ENST00000580367 79 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.66□□□□□ -2.3
H3F3AP84243 DEFB131E-202ENST00000602581 683 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
H3F3AP84243 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.65□□□□□ -2.3
H3F3AP84243 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
H3F3AP84243 RNU1-96P-201ENST00000364163 162 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 RNA5SP259-201ENST00000365541 109 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 MIR544A-201ENST00000384855 91 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 RNU6-1176P-201ENST00000390955 107 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 MTCO3P29-201ENST00000432119 779 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 SNORA70.22-201ENST00000517160 124 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.31
H3F3AP84243 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
H3F3AP84243 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.65□□□□□ -2.31
H3F3AP84243 MIR548AC-201ENST00000585049 88 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 AL034555.1-201ENST00000604816 211 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 AC018889.1-201ENST00000605372 397 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 AC024060.1-201ENST00000607052 494 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 AC091965.4-201ENST00000607691 587 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 AC026585.1-201ENST00000619582 524 ntBASIC0.65□□□□□ -2.31
H3F3AP84243 RNU4-15P-201ENST00000362613 141 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 RNU6-511P-201ENST00000363496 107 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 MIR19B1-201ENST00000384829 87 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 ARL5AP1-201ENST00000418991 388 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 AL008629.1-201ENST00000438615 184 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 MTCO3P9-201ENST00000506989 781 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 Y_RNA.676-201ENST00000516393 96 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 AC011604.1-201ENST00000545978 196 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 AL158032.1-201ENST00000605401 106 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 AC008945.2-201ENST00000606056 604 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.64□□□□□ -2.31
H3F3AP84243 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.64□□□□□ -2.31
H3F3AP84243 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.64□□□□□ -2.31
H3F3AP84243 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
H3F3AP84243 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
H3F3AP84243 RNU6-384P-201ENST00000364900 104 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms