Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 USP9YP18-201ENST00000425912 695 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 MTCO2P19-201ENST00000427513 598 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.18□□□□□ -2.06
ASIC1P78348 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.18□□□□□ -2.06
ASIC1P78348 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.18□□□□□ -2.06
ASIC1P78348 AL137159.1-201ENST00000452808 512 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AL353752.1-201ENST00000454946 260 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 RNU7-167P-201ENST00000459160 62 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 SNRPGP7-201ENST00000469016 106 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AC108078.1-201ENST00000508073 725 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.18□□□□□ -2.06
ASIC1P78348 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 SNORA25.17-201ENST00000517184 124 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AC022880.1-201ENST00000534017 973 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 MTCO3P23-201ENST00000561363 289 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AGGF1P4-201ENST00000568249 801 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.18□□□□□ -2.06
ASIC1P78348 SNRPGP17-201ENST00000603780 214 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AC107304.1-201ENST00000604229 296 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 AC004908.3-201ENST00000610248 625 ntBASIC2.18□□□□□ -2.06
ASIC1P78348 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ASIC1P78348 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ASIC1P78348 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ASIC1P78348 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ASIC1P78348 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ASIC1P78348 SNORD116-2-201ENST00000384274 95 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 SNORD116-1-201ENST00000384335 95 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 SNORD116-6-201ENST00000384711 96 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ASIC1P78348 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ASIC1P78348 DEFB108C-201ENST00000400154 252 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 AL606923.1-201ENST00000406616 190 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 RNU4-55P-201ENST00000410731 137 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 MTND1P23-201ENST00000416931 372 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.17□□□□□ -2.06
ASIC1P78348 AC073415.1-201ENST00000449240 153 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 AL163973.1-201ENST00000484753 577 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.17□□□□□ -2.06
ASIC1P78348 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.17□□□□□ -2.06
ASIC1P78348 AC233702.2-202ENST00000562547 291 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 BNIP3P16-201ENST00000589779 534 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 uc_338.34-201ENST00000617467 174 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 YWHAEP7-203ENST00000622054 312 ntBASIC2.17□□□□□ -2.06
ASIC1P78348 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ASIC1P78348 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
ASIC1P78348 RNU6-428P-201ENST00000362942 107 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 RNU6-944P-201ENST00000364023 107 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 RNU6-336P-201ENST00000364891 107 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 RNU6-1119P-201ENST00000384349 108 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 HMGN2P39-201ENST00000398005 273 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 RNU2-20P-201ENST00000410425 191 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 EIF1AXP1-201ENST00000419267 435 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.16□□□□□ -2.06
ASIC1P78348 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.16□□□□□ -2.06
ASIC1P78348 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ASIC1P78348 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.16□□□□□ -2.06
ASIC1P78348 AC243964.1-201ENST00000441814 261 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 MTND4P7-201ENST00000523876 130 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.16□□□□□ -2.06
ASIC1P78348 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.16□□□□□ -2.06
ASIC1P78348 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.16□□□□□ -2.06
ASIC1P78348 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.16□□□□□ -2.06
ASIC1P78348 MIR5583-1-201ENST00000580941 59 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 APOOP1-201ENST00000604695 592 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 AL354685.2-201ENST00000448218 1447 ntBASIC2.16□□□□□ -2.06
ASIC1P78348 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ASIC1P78348 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ASIC1P78348 SNORA40.19-201ENST00000390846 128 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 SNORD37.1-201ENST00000390968 65 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 RNU6-1158P-201ENST00000391167 107 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 SNORA26.9-201ENST00000391322 122 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 RPS15AP10-201ENST00000432472 382 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.15□□□□□ -2.07
ASIC1P78348 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 TPT1P7-201ENST00000458300 517 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 RNU7-180P-201ENST00000459240 63 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 RPL38P4-201ENST00000502376 214 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 HMGB1P35-201ENST00000503360 598 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 AK3P2-201ENST00000507976 429 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 AC091133.4-201ENST00000511142 308 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.15□□□□□ -2.07
ASIC1P78348 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.15□□□□□ -2.07
ASIC1P78348 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.15□□□□□ -2.07
ASIC1P78348 AC103987.3-201ENST00000582071 292 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 NBR2-204ENST00000587322 63 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ASIC1P78348 AC063943.3-201ENST00000615562 356 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
ASIC1P78348 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
ASIC1P78348 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.14□□□□□ -2.07
ASIC1P78348 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
ASIC1P78348 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
ASIC1P78348 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ASIC1P78348 Y_RNA.255-201ENST00000364581 97 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 253 ms