Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
YBX1P67809 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
YBX1P67809 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.65□□□□□ -1.83
YBX1P67809 RNA5SP119-201ENST00000362715 117 ntBASIC3.65□□□□□ -1.83
YBX1P67809 RNA5SP124-201ENST00000362739 110 ntBASIC3.65□□□□□ -1.83
YBX1P67809 SNORD56.1-201ENST00000362913 68 ntBASIC3.65□□□□□ -1.83
YBX1P67809 Y_RNA.230-201ENST00000364348 109 ntBASIC3.65□□□□□ -1.83
YBX1P67809 SNORD50B-201ENST00000364995 70 ntBASIC3.65□□□□□ -1.83
YBX1P67809 SNORD116-20-201ENST00000384529 92 ntBASIC3.65□□□□□ -1.83
YBX1P67809 MIR491-201ENST00000384877 84 ntBASIC3.65□□□□□ -1.83
YBX1P67809 MIR487A-201ENST00000385009 80 ntBASIC3.65□□□□□ -1.83
YBX1P67809 MIR329-1-201ENST00000385028 80 ntBASIC3.65□□□□□ -1.83
YBX1P67809 RNU6-159P-201ENST00000391080 106 ntBASIC3.65□□□□□ -1.83
YBX1P67809 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
YBX1P67809 U3.39-201ENST00000408569 239 ntBASIC3.65□□□□□ -1.83
YBX1P67809 RN7SKP156-201ENST00000410308 342 ntBASIC3.65□□□□□ -1.83
YBX1P67809 RNU6-1135P-201ENST00000411083 103 ntBASIC3.65□□□□□ -1.83
YBX1P67809 RPL23AP36-201ENST00000413895 458 ntBASIC3.65□□□□□ -1.83
YBX1P67809 AC024067.1-201ENST00000426199 223 ntBASIC3.65□□□□□ -1.83
YBX1P67809 GOT2P5-201ENST00000433995 546 ntBASIC3.65□□□□□ -1.83
YBX1P67809 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.65□□□□□ -1.83
YBX1P67809 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.65□□□□□ -1.83
YBX1P67809 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.65□□□□□ -1.83
YBX1P67809 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.65□□□□□ -1.83
YBX1P67809 RNU1-103P-201ENST00000516502 125 ntBASIC3.65□□□□□ -1.83
YBX1P67809 RNU6-703P-201ENST00000516946 107 ntBASIC3.65□□□□□ -1.83
YBX1P67809 CYCSP30-201ENST00000546447 172 ntBASIC3.65□□□□□ -1.83
YBX1P67809 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.65□□□□□ -1.83
YBX1P67809 MIR4308-201ENST00000580634 81 ntBASIC3.65□□□□□ -1.83
YBX1P67809 AL138963.2-201ENST00000605137 226 ntBASIC3.65□□□□□ -1.83
YBX1P67809 AC019176.2-201ENST00000611579 315 ntBASIC3.65□□□□□ -1.83
YBX1P67809 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
YBX1P67809 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
YBX1P67809 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
YBX1P67809 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.65□□□□□ -1.83
YBX1P67809 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
YBX1P67809 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
YBX1P67809 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
YBX1P67809 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
YBX1P67809 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
YBX1P67809 RNU6-942P-201ENST00000363002 107 ntBASIC3.64□□□□□ -1.83
YBX1P67809 RNU5B-2P-201ENST00000363036 113 ntBASIC3.64□□□□□ -1.83
YBX1P67809 Y_RNA.136-201ENST00000363444 102 ntBASIC3.64□□□□□ -1.83
YBX1P67809 SNORD32A-201ENST00000364805 84 ntBASIC3.64□□□□□ -1.83
YBX1P67809 RNU1-140P-201ENST00000365040 165 ntBASIC3.64□□□□□ -1.83
YBX1P67809 RNU6-1145P-201ENST00000384246 107 ntBASIC3.64□□□□□ -1.83
YBX1P67809 U8.10-201ENST00000384260 133 ntBASIC3.64□□□□□ -1.83
YBX1P67809 RNU6-1117P-201ENST00000384525 104 ntBASIC3.64□□□□□ -1.83
YBX1P67809 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
YBX1P67809 MTHFD2P2-201ENST00000407725 247 ntBASIC3.64□□□□□ -1.83
YBX1P67809 Y_RNA.597-201ENST00000410463 100 ntBASIC3.64□□□□□ -1.83
YBX1P67809 AC002075.2-201ENST00000425207 252 ntBASIC3.64□□□□□ -1.83
YBX1P67809 UQCRBP2-201ENST00000447827 297 ntBASIC3.64□□□□□ -1.83
YBX1P67809 SNORD2.1-201ENST00000458762 69 ntBASIC3.64□□□□□ -1.83
YBX1P67809 SNORA40.9-201ENST00000515895 93 ntBASIC3.64□□□□□ -1.83
YBX1P67809 RNU6-58P-201ENST00000517143 103 ntBASIC3.64□□□□□ -1.83
YBX1P67809 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.64□□□□□ -1.83
YBX1P67809 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.64□□□□□ -1.83
YBX1P67809 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.64□□□□□ -1.83
YBX1P67809 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.64□□□□□ -1.83
YBX1P67809 ZNF192P1-203ENST00000565888 810 ntBASIC3.64□□□□□ -1.83
YBX1P67809 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
YBX1P67809 AC005176.2-201ENST00000596933 147 ntBASIC3.64□□□□□ -1.83
YBX1P67809 AL121772.2-201ENST00000614331 297 ntBASIC3.64□□□□□ -1.83
YBX1P67809 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
YBX1P67809 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.64□□□□□ -1.83
YBX1P67809 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.64□□□□□ -1.83
YBX1P67809 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.64□□□□□ -1.83
YBX1P67809 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
YBX1P67809 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
YBX1P67809 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
YBX1P67809 RBBP8P1-201ENST00000449447 1844 ntBASIC3.63□□□□□ -1.83
YBX1P67809 FTLP6-201ENST00000355274 422 ntBASIC3.63□□□□□ -1.83
YBX1P67809 MIR423-201ENST00000362201 94 ntBASIC3.63□□□□□ -1.83
YBX1P67809 MIR518D-201ENST00000385014 87 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AL591419.1-201ENST00000427423 339 ntBASIC3.63□□□□□ -1.83
YBX1P67809 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.63□□□□□ -1.83
YBX1P67809 NDUFB1P1-201ENST00000435191 180 ntBASIC3.63□□□□□ -1.83
YBX1P67809 GPM6BP3-201ENST00000442797 145 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AC009237.7-201ENST00000447357 229 ntBASIC3.63□□□□□ -1.83
YBX1P67809 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
YBX1P67809 RNU1-61P-201ENST00000516107 151 ntBASIC3.63□□□□□ -1.83
YBX1P67809 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
YBX1P67809 RNU6-1198P-201ENST00000516904 67 ntBASIC3.63□□□□□ -1.83
YBX1P67809 SNORA70.24-201ENST00000517233 118 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AP005660.1-201ENST00000522972 293 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.63□□□□□ -1.83
YBX1P67809 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.63□□□□□ -1.83
YBX1P67809 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.63□□□□□ -1.83
YBX1P67809 AL137849.1-201ENST00000604767 169 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
YBX1P67809 RNU1-30P-201ENST00000606575 163 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AC108706.1-201ENST00000611053 297 ntBASIC3.63□□□□□ -1.83
YBX1P67809 SNORA43.4-201ENST00000629559 138 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AC244205.2-202ENST00000635781 342 ntBASIC3.63□□□□□ -1.83
YBX1P67809 AC012442.3-202ENST00000636742 206 ntBASIC3.63□□□□□ -1.83
YBX1P67809 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
YBX1P67809 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
YBX1P67809 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms