Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 SNORA40.15-201ENST00000516884 107 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 IGHV3-76-201ENST00000522465 295 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.65□□□□□ -1.83
HERVK_113P62684 AC090517.1-201ENST00000569307 266 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 MIR4672-201ENST00000583126 81 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 AC078899.3-201ENST00000599065 212 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 AC006023.1-201ENST00000603944 259 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 RAC1P9-201ENST00000604990 392 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 MIR8062-201ENST00000621515 85 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 AC092628.2-201ENST00000622492 339 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HERVK_113P62684 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HERVK_113P62684 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HERVK_113P62684 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERVK_113P62684 MTND5P7-201ENST00000413558 1798 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 Y_RNA.222-201ENST00000364264 102 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 Y_RNA.358-201ENST00000365491 99 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 RNU6-805P-201ENST00000365643 106 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 RNU6-708P-201ENST00000384217 107 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 Y_RNA.471-201ENST00000384312 102 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 RNU6-1035P-201ENST00000384477 107 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 MT-TG-201ENST00000387429 68 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 MIR190B-201ENST00000401119 79 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AP000275.1-201ENST00000411943 390 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 SETP5-201ENST00000437270 562 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AC073910.1-201ENST00000445047 438 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AC125238.1-201ENST00000448842 249 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.64□□□□□ -1.83
HERVK_113P62684 RNU7-175P-201ENST00000515915 61 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 Y_RNA.706-201ENST00000516933 99 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.64□□□□□ -1.83
HERVK_113P62684 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AL159153.1-201ENST00000619688 317 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 AC073308.1-201ENST00000623696 305 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 MIR622-201ENST00000638396 96 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.64□□□□□ -1.83
HERVK_113P62684 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
HERVK_113P62684 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERVK_113P62684 AC007256.1-201ENST00000392253 2765 ntBASIC3.64□□□□□ -1.83
HERVK_113P62684 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HERVK_113P62684 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERVK_113P62684 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.63□□□□□ -1.83
HERVK_113P62684 AC233981.2-201ENST00000611524 1614 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 RNU6-942P-201ENST00000363002 107 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 Y_RNA.214-201ENST00000364201 112 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 SNORA71.1-201ENST00000364523 117 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HERVK_113P62684 MTCYBP2-201ENST00000407745 171 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 RN7SKP220-201ENST00000410611 288 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 NDUFS5P4-201ENST00000412983 318 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 ELOCP20-201ENST00000422460 345 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.63□□□□□ -1.83
HERVK_113P62684 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.63□□□□□ -1.83
HERVK_113P62684 RPL26P9-201ENST00000457466 433 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 SNRPGP7-201ENST00000469016 106 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 RN7SL283P-201ENST00000489055 303 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.63□□□□□ -1.83
HERVK_113P62684 MTND4LP22-201ENST00000508209 276 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AC006445.2-201ENST00000510061 472 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 SNORA25.11-201ENST00000515935 105 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AC091144.1-201ENST00000519573 138 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 MRPS36P4-201ENST00000534436 298 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.63□□□□□ -1.83
HERVK_113P62684 AC060766.3-201ENST00000591442 263 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AC125232.2-201ENST00000592457 143 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AC062037.2-201ENST00000610137 73 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERVK_113P62684 CUL1P1-201ENST00000509510 2425 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.63□□□□□ -1.83
HERVK_113P62684 AC002546.1-201ENST00000588041 2504 ntBASIC3.63□□□□□ -1.83
HERVK_113P62684 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HERVK_113P62684 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.62□□□□□ -1.83
HERVK_113P62684 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 SNORD56.1-201ENST00000362913 68 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 Y_RNA.307-201ENST00000365022 117 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RNU1-100P-201ENST00000365255 165 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RNU6-968P-201ENST00000384076 107 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 Y_RNA.461-201ENST00000384263 103 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 AC245291.1-201ENST00000419501 328 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 AC099548.1-201ENST00000421443 426 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.62□□□□□ -1.83
HERVK_113P62684 AL513124.1-201ENST00000450410 614 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.62□□□□□ -1.83
HERVK_113P62684 RPS27P29-201ENST00000463110 252 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 TOMM22P6-201ENST00000465035 409 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RPS27AP10-201ENST00000496103 208 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 Y_RNA.668-201ENST00000516233 93 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RNU6-911P-201ENST00000516523 104 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 AC068657.1-201ENST00000520807 306 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms