Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC091903.1-201ENST00000624322 454 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 MIR7153-201ENST00000637758 57 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SUMO3P55854 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SUMO3P55854 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SUMO3P55854 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SUMO3P55854 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SUMO3P55854 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SUMO3P55854 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SUMO3P55854 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.96□□□□□ -1.93
SUMO3P55854 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SUMO3P55854 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SUMO3P55854 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
SUMO3P55854 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.96□□□□□ -1.94
SUMO3P55854 Y_RNA.405-201ENST00000383979 100 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 Y_RNA.451-201ENST00000384200 100 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 Y_RNA.524-201ENST00000384564 100 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 Y_RNA.561-201ENST00000384694 100 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AL513477.1-202ENST00000417061 214 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 RPL30P4-201ENST00000429309 333 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 Z82188.1-201ENST00000436709 154 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AL035666.1-201ENST00000446195 348 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AC146507.2-201ENST00000460608 476 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.96□□□□□ -1.94
SUMO3P55854 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.96□□□□□ -1.94
SUMO3P55854 AC090096.1-201ENST00000489168 390 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
SUMO3P55854 COX6CP5-201ENST00000527162 228 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SUMO3P55854 CYP4A27P-201ENST00000567218 190 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AC004584.2-201ENST00000570407 410 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.96□□□□□ -1.94
SUMO3P55854 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.96□□□□□ -1.94
SUMO3P55854 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.96□□□□□ -1.94
SUMO3P55854 RPL30P11-203ENST00000598995 310 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AL034555.1-201ENST00000604816 211 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AC100812.1-201ENST00000607622 580 ntBASIC2.96□□□□□ -1.94
SUMO3P55854 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.96□□□□□ -1.94
SUMO3P55854 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 RNA5SP383-201ENST00000362934 120 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SUMO3P55854 RPS26P42-201ENST00000413485 326 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 YME1L1P1-201ENST00000429435 297 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 RPS15AP7-201ENST00000439294 405 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.95□□□□□ -1.94
SUMO3P55854 PRSS3P4-201ENST00000453323 162 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 AC080013.2-201ENST00000460866 323 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 RPL23AP70-201ENST00000483361 460 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 PHBP14-201ENST00000512887 367 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 RNU7-4P-201ENST00000516961 62 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.95□□□□□ -1.94
SUMO3P55854 AC023442.1-201ENST00000531247 422 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 MIR3199-1-201ENST00000582434 88 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 MIR3171-201ENST00000584270 74 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 AL162713.1-201ENST00000604480 262 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 AC069294.1-201ENST00000608397 350 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 AC005520.5-201ENST00000613926 164 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
SUMO3P55854 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.95□□□□□ -1.94
SUMO3P55854 MTND4P27-201ENST00000450813 1354 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SUMO3P55854 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
SUMO3P55854 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SUMO3P55854 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SUMO3P55854 RNA5SP267-201ENST00000364893 126 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 RNU1-115P-201ENST00000365329 160 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 RNU6-17P-201ENST00000384245 107 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 RNU6-18P-201ENST00000384527 107 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 MIR23B-201ENST00000384832 97 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 MIR625-201ENST00000385047 85 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 PMCHL1-202ENST00000423102 261 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 AC005326.1-201ENST00000429197 123 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.94□□□□□ -1.94
SUMO3P55854 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.94□□□□□ -1.94
SUMO3P55854 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 OR2AQ1P-201ENST00000451972 200 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 AC073901.1-201ENST00000462471 408 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 AC109925.1-201ENST00000478069 331 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 Y_RNA.661-201ENST00000516003 99 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.94□□□□□ -1.94
SUMO3P55854 ELOCP31-201ENST00000540463 467 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 MIR3616-201ENST00000584070 92 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 AL353621.2-201ENST00000605340 133 ntBASIC2.94□□□□□ -1.94
SUMO3P55854 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.94□□□□□ -1.94
SUMO3P55854 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.94□□□□□ -1.94
SUMO3P55854 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SUMO3P55854 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SUMO3P55854 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.93□□□□□ -1.94
SUMO3P55854 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
SUMO3P55854 Y_RNA.28-201ENST00000362554 111 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms