Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-220P-201ENST00000390919 107 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 OR9R1P-201ENST00000412200 877 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGCS2P54868 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 FGF7P6-202ENST00000451282 293 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 AC092989.1-201ENST00000481235 277 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 MRPL42P6-201ENST00000486397 371 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 SNORA31.6-201ENST00000516241 130 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 Y_RNA.687-201ENST00000516558 91 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 SNORD60.2-201ENST00000516883 86 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGCS2P54868 CENPUP1-201ENST00000526649 1202 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 MIR3683-201ENST00000580847 82 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.16□□□□□ -2.06
HMGCS2P54868 RNU6-89P-201ENST00000606519 100 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 AC002044.1-201ENST00000606707 158 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMGCS2P54868 DISC2.1-201ENST00000612827 205 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 AC011890.2-201ENST00000613393 294 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 RMST_7.1-201ENST00000621935 268 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGCS2P54868 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
HMGCS2P54868 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGCS2P54868 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.06
HMGCS2P54868 Y_RNA.231-201ENST00000364358 102 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 RNU6-1280P-201ENST00000365211 107 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 FTH1P15-201ENST00000406984 280 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 RNU6-1328P-201ENST00000410938 106 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGCS2P54868 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGCS2P54868 MICF-203ENST00000432679 129 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGCS2P54868 AL121601.2-201ENST00000438019 707 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGCS2P54868 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 RNU6-1053P-201ENST00000515930 101 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 ACA59.2-201ENST00000517061 156 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 SCARNA3-201ENST00000517097 143 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.15□□□□□ -2.07
HMGCS2P54868 VN1R80P-201ENST00000597126 338 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 AC123912.5-201ENST00000605470 343 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGCS2P54868 OR4G1P-203ENST00000641984 1631 ntBASIC2.15□□□□□ -2.07
HMGCS2P54868 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMGCS2P54868 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGCS2P54868 Y_RNA.453-201ENST00000384223 109 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 SNORD37.1-201ENST00000390968 65 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 POLHP1-201ENST00000411806 470 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 SNRPEP10-201ENST00000420249 274 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGCS2P54868 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS2P54868 AC091885.1-201ENST00000506658 268 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 AC010186.2-204ENST00000537668 439 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 MIR5571-201ENST00000577998 113 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGCS2P54868 AC104458.1-201ENST00000608243 463 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 AC092807.2-201ENST00000609367 243 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 AC103705.1-201ENST00000619013 241 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 AC138627.2-201ENST00000624202 601 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 Z69720.2-201ENST00000624755 279 ntBASIC2.14□□□□□ -2.07
HMGCS2P54868 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
HMGCS2P54868 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS2P54868 RNU6-82P-201ENST00000363970 107 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 RNU6-266P-201ENST00000364225 107 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 Y_RNA.295-201ENST00000364918 102 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 Y_RNA.480-201ENST00000384364 102 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 RNA5SP219-201ENST00000390940 113 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 MIR1277-201ENST00000408536 78 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 Y_RNA.615-201ENST00000410769 117 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGCS2P54868 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGCS2P54868 ERLEC1P1-201ENST00000433806 578 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 HMGN2P26-201ENST00000463169 339 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 AC117503.1-201ENST00000472241 394 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGCS2P54868 AC069439.1-201ENST00000494739 167 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 Y_RNA.665-201ENST00000516177 98 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 RNU6-250P-201ENST00000516958 103 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 RPS3AP23-202ENST00000574601 686 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 AP000907.4-201ENST00000604143 237 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 APOOP1-201ENST00000604695 592 ntBASIC2.13□□□□□ -2.07
HMGCS2P54868 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGCS2P54868 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGCS2P54868 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HMGCS2P54868 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS2P54868 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMGCS2P54868 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HMGCS2P54868 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGCS2P54868 MIR378A-201ENST00000362177 66 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms