Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL139132.1-201ENST00000431587 344 ntBASIC3.09□□□□□ -1.91
COPAP53621 RPL23AP50-201ENST00000434149 455 ntBASIC3.09□□□□□ -1.91
COPAP53621 RPS12P18-201ENST00000442381 270 ntBASIC3.09□□□□□ -1.91
COPAP53621 AP001324.2-201ENST00000461163 319 ntBASIC3.09□□□□□ -1.91
COPAP53621 UBE2DNL-203ENST00000474922 222 ntBASIC3.09□□□□□ -1.91
COPAP53621 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
COPAP53621 RNU5B-3P-201ENST00000516601 115 ntBASIC3.09□□□□□ -1.91
COPAP53621 AP005902.1-201ENST00000521358 186 ntBASIC3.09□□□□□ -1.91
COPAP53621 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.09□□□□□ -1.91
COPAP53621 AL442663.2-201ENST00000554385 511 ntBASIC3.09□□□□□ -1.91
COPAP53621 MIR4273-201ENST00000582824 84 ntBASIC3.09□□□□□ -1.91
COPAP53621 AC005899.2-201ENST00000584353 90 ntBASIC3.09□□□□□ -1.91
COPAP53621 AC241585.2-209ENST00000638217 143 ntBASIC3.09□□□□□ -1.91
COPAP53621 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
COPAP53621 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
COPAP53621 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.08□□□□□ -1.92
COPAP53621 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
COPAP53621 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.08□□□□□ -1.92
COPAP53621 AC108206.1-201ENST00000570186 4159 ntBASIC3.08□□□□□ -1.92
COPAP53621 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
COPAP53621 SNORA63-201ENST00000363450 132 ntBASIC3.08□□□□□ -1.92
COPAP53621 RNU6-1227P-201ENST00000383981 107 ntBASIC3.08□□□□□ -1.92
COPAP53621 Y_RNA.500-201ENST00000384466 111 ntBASIC3.08□□□□□ -1.92
COPAP53621 MIR544A-201ENST00000384855 91 ntBASIC3.08□□□□□ -1.92
COPAP53621 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
COPAP53621 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.08□□□□□ -1.92
COPAP53621 AC243964.1-201ENST00000441814 261 ntBASIC3.08□□□□□ -1.92
COPAP53621 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.08□□□□□ -1.92
COPAP53621 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.08□□□□□ -1.92
COPAP53621 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.08□□□□□ -1.92
COPAP53621 MIR8076-201ENST00000611401 83 ntBASIC3.08□□□□□ -1.92
COPAP53621 AC092608.2-201ENST00000624427 218 ntBASIC3.08□□□□□ -1.92
COPAP53621 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.08□□□□□ -1.92
COPAP53621 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
COPAP53621 AC000403.1-201ENST00000613696 3585 ntBASIC3.08□□□□□ -1.92
COPAP53621 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
COPAP53621 RNU6-596P-201ENST00000365395 98 ntBASIC3.07□□□□□ -1.92
COPAP53621 U8.8-201ENST00000365399 135 ntBASIC3.07□□□□□ -1.92
COPAP53621 RNU6-487P-201ENST00000365430 104 ntBASIC3.07□□□□□ -1.92
COPAP53621 RNU6-890P-201ENST00000384121 107 ntBASIC3.07□□□□□ -1.92
COPAP53621 RNU6-842P-201ENST00000384269 107 ntBASIC3.07□□□□□ -1.92
COPAP53621 RNU6-692P-201ENST00000384496 107 ntBASIC3.07□□□□□ -1.92
COPAP53621 EEF1A1P41-201ENST00000414667 207 ntBASIC3.07□□□□□ -1.92
COPAP53621 AC138623.1-201ENST00000418060 216 ntBASIC3.07□□□□□ -1.92
COPAP53621 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
COPAP53621 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.07□□□□□ -1.92
COPAP53621 AC007969.2-201ENST00000441891 191 ntBASIC3.07□□□□□ -1.92
COPAP53621 AC009296.1-201ENST00000443146 155 ntBASIC3.07□□□□□ -1.92
COPAP53621 AC117440.1-201ENST00000474107 571 ntBASIC3.07□□□□□ -1.92
COPAP53621 RPL23AP70-201ENST00000483361 460 ntBASIC3.07□□□□□ -1.92
COPAP53621 AP001025.1-201ENST00000486139 332 ntBASIC3.07□□□□□ -1.92
COPAP53621 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.07□□□□□ -1.92
COPAP53621 COX6CP5-201ENST00000527162 228 ntBASIC3.07□□□□□ -1.92
COPAP53621 MIR3616-201ENST00000584070 92 ntBASIC3.07□□□□□ -1.92
COPAP53621 RNU6-91P-201ENST00000607774 107 ntBASIC3.07□□□□□ -1.92
COPAP53621 AC007742.2-201ENST00000618226 398 ntBASIC3.07□□□□□ -1.92
COPAP53621 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.07□□□□□ -1.92
COPAP53621 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COPAP53621 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.07□□□□□ -1.92
COPAP53621 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COPAP53621 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.07□□□□□ -1.92
COPAP53621 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COPAP53621 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.06□□□□□ -1.92
COPAP53621 AC073325.2-201ENST00000339545 159 ntBASIC3.06□□□□□ -1.92
COPAP53621 MIR369-201ENST00000362155 70 ntBASIC3.06□□□□□ -1.92
COPAP53621 RNU6-227P-201ENST00000362865 103 ntBASIC3.06□□□□□ -1.92
COPAP53621 Y_RNA.138-201ENST00000363462 102 ntBASIC3.06□□□□□ -1.92
COPAP53621 SNORA68.1-201ENST00000364537 132 ntBASIC3.06□□□□□ -1.92
COPAP53621 SET-203ENST00000372688 801 ntTSL 2 BASIC3.06□□□□□ -1.92
COPAP53621 SNORA75.6-201ENST00000391318 127 ntBASIC3.06□□□□□ -1.92
COPAP53621 BTF3L4P2-201ENST00000392798 346 ntBASIC3.06□□□□□ -1.92
COPAP53621 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
COPAP53621 AL591034.2-201ENST00000402839 359 ntBASIC3.06□□□□□ -1.92
COPAP53621 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
COPAP53621 RNA5SP390-201ENST00000410191 113 ntBASIC3.06□□□□□ -1.92
COPAP53621 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.06□□□□□ -1.92
COPAP53621 RPS15AP7-201ENST00000439294 405 ntBASIC3.06□□□□□ -1.92
COPAP53621 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.06□□□□□ -1.92
COPAP53621 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COPAP53621 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.06□□□□□ -1.92
COPAP53621 Y_RNA.639-201ENST00000458981 102 ntBASIC3.06□□□□□ -1.92
COPAP53621 SNRPGP7-201ENST00000469016 106 ntBASIC3.06□□□□□ -1.92
COPAP53621 RPL30P12-201ENST00000474666 353 ntBASIC3.06□□□□□ -1.92
COPAP53621 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
COPAP53621 SCARNA16.2-201ENST00000516520 172 ntBASIC3.06□□□□□ -1.92
COPAP53621 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
COPAP53621 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.06□□□□□ -1.92
COPAP53621 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.06□□□□□ -1.92
COPAP53621 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.06□□□□□ -1.92
COPAP53621 AC105137.2-201ENST00000569073 466 ntBASIC3.06□□□□□ -1.92
COPAP53621 AC090897.2-201ENST00000581715 130 ntBASIC3.06□□□□□ -1.92
COPAP53621 AC078795.3-201ENST00000602913 472 ntBASIC3.06□□□□□ -1.92
COPAP53621 AP001836.1-201ENST00000604675 523 ntBASIC3.06□□□□□ -1.92
COPAP53621 AL080274.1-201ENST00000605565 220 ntBASIC3.06□□□□□ -1.92
COPAP53621 AC096772.1-201ENST00000609146 564 ntBASIC3.06□□□□□ -1.92
COPAP53621 uc_338.14-201ENST00000613162 166 ntBASIC3.06□□□□□ -1.92
COPAP53621 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.06□□□□□ -1.92
COPAP53621 AC135776.4-201ENST00000624300 1904 ntBASIC3.06□□□□□ -1.92
COPAP53621 AC134503.1-201ENST00000633048 54 ntBASIC3.06□□□□□ -1.92
COPAP53621 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 332.2 ms