Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AL669831.1-202ENST00000428504 417 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 HAUS6P2-201ENST00000433254 2404 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AL596276.1-201ENST00000434465 418 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AL451074.3-201ENST00000437709 472 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 GTF2IP13-201ENST00000438487 386 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.53□□□□□ -2.16
CXCL12P48061 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL12P48061 C1DP4-201ENST00000455429 424 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL12P48061 CYP2C59P-201ENST00000457790 269 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AC006512.1-201ENST00000468816 291 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AC117503.1-201ENST00000472241 394 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNU2-53P-201ENST00000516257 147 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNA5SP220-201ENST00000516298 104 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNA5SP503-201ENST00000517047 117 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNU2-19P-201ENST00000517288 84 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.53□□□□□ -2.16
CXCL12P48061 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL12P48061 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.53□□□□□ -2.16
CXCL12P48061 AC093249.1-201ENST00000567049 203 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL12P48061 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 uc_338.15-201ENST00000615470 191 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.53□□□□□ -2.16
CXCL12P48061 SEPT14P19-203ENST00000633205 211 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CXCL12P48061 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CXCL12P48061 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CXCL12P48061 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CXCL12P48061 RNU6-78P-201ENST00000362897 107 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 RNA5SP240-201ENST00000365355 128 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 RNU4-48P-201ENST00000365559 182 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 RAP1BP3-201ENST00000407180 549 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 RNU2-9P-201ENST00000410194 145 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.52□□□□□ -2.17
CXCL12P48061 RPL31P63-201ENST00000422565 375 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL12P48061 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.52□□□□□ -2.17
CXCL12P48061 MTND4P32-201ENST00000437189 1237 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC009238.1-201ENST00000442165 424 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC009237.6-201ENST00000446969 424 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AL121594.1-201ENST00000475906 575 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.52□□□□□ -2.17
CXCL12P48061 AC074344.1-201ENST00000512823 224 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC104136.1-201ENST00000512969 394 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 RNU6-430P-201ENST00000517078 107 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL12P48061 AC118273.2-201ENST00000532092 465 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.52□□□□□ -2.17
CXCL12P48061 SUB1P2-201ENST00000556401 297 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 MIR4528-201ENST00000577763 90 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL12P48061 AC090897.2-201ENST00000581715 130 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AL109918.3-201ENST00000603072 338 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC025449.1-201ENST00000603896 529 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC087752.4-201ENST00000605911 462 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC008147.4-201ENST00000617570 1204 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC136475.10-201ENST00000620253 385 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 Z69908.1-201ENST00000622603 247 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC009161.2-201ENST00000624626 138 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.52□□□□□ -2.17
CXCL12P48061 MIR3974-201ENST00000637126 96 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AC008555.8-201ENST00000623602 2168 ntBASIC1.52□□□□□ -2.17
CXCL12P48061 AL390237.1-201ENST00000404226 1415 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC090960.1-201ENST00000421072 306 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 MTATP6P17-201ENST00000431030 672 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 MTCO2P11-201ENST00000431069 680 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AL365400.1-201ENST00000431854 640 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC016691.1-201ENST00000441321 413 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC132479.1-201ENST00000449160 144 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 RPL30P12-201ENST00000474666 353 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC018868.1-201ENST00000491307 315 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL12P48061 ARL2BPP4-201ENST00000506854 471 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 MTCYBP40-201ENST00000509390 1135 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL12P48061 SNORA4.4-201ENST00000515921 135 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC109329.1-201ENST00000518744 317 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.51□□□□□ -2.17
CXCL12P48061 AP002963.1-201ENST00000530590 184 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC233702.2-202ENST00000562547 291 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 MIR4703-201ENST00000577728 79 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 MIR4529-201ENST00000578110 78 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC119751.7-201ENST00000600494 245 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC005034.5-201ENST00000604219 466 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC008945.2-201ENST00000606056 604 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC072046.2-201ENST00000618366 268 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 MIR6734-201ENST00000621166 68 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC022079.1-201ENST00000621546 602 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 AC097372.5-201ENST00000623665 376 ntBASIC1.51□□□□□ -2.17
CXCL12P48061 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CXCL12P48061 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.51□□□□□ -2.17
CXCL12P48061 RNU6-212P-201ENST00000362642 104 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 RNU5E-7P-201ENST00000365290 117 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 SNORA25B-201ENST00000365507 128 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 SNORA75-201ENST00000384158 137 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms