Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD12P35452 CBX3P7-201ENST00000532876 502 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD12P35452 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD12P35452 MTCO3P13-201ENST00000577757 781 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD12P35452 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD12P35452 AC009314.1-201ENST00000603871 304 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 CYP2C61P-201ENST00000604072 290 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 RPL23AP88-201ENST00000605759 454 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD12P35452 U1.23-201ENST00000610293 146 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AC011890.2-201ENST00000613393 294 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 RNU1-68P-201ENST00000615382 146 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 MIR6134-201ENST00000617606 109 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 U1.39-201ENST00000621562 146 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AC092608.2-201ENST00000624427 218 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AC134503.1-201ENST00000633048 54 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD12P35452 MTND5P30-201ENST00000452896 1731 ntBASIC3.04□□□□□ -1.92
HOXD12P35452 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 MTND4P23-201ENST00000447723 1363 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD12P35452 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD12P35452 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD12P35452 MTCYBP6-201ENST00000441810 138 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 AL135938.1-201ENST00000443141 297 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 AC013470.1-201ENST00000453438 462 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 AC006026.2-201ENST00000457376 180 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD12P35452 Y_RNA.639-201ENST00000458981 102 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 SNORA43.2-201ENST00000516652 128 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HOXD12P35452 CPDP1-201ENST00000579660 283 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 MIR3976-201ENST00000606807 139 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD12P35452 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HOXD12P35452 uc_338.14-201ENST00000613162 166 ntBASIC3.03□□□□□ -1.92
HOXD12P35452 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD12P35452 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD12P35452 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
HOXD12P35452 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD12P35452 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD12P35452 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD12P35452 RNU6-942P-201ENST00000363002 107 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 Y_RNA.128-201ENST00000363391 112 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 Y_RNA.197-201ENST00000364004 102 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 RNU6-1280P-201ENST00000365211 107 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 RNU6-474P-201ENST00000384243 107 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 RNU6-842P-201ENST00000384269 107 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 RNU6-331P-201ENST00000384724 107 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 MIR147B-201ENST00000390185 80 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 RPL19P1-201ENST00000411635 428 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD12P35452 PTGES3P4-201ENST00000426243 356 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AL133396.1-201ENST00000432048 687 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD12P35452 GSTA11P-201ENST00000452866 669 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 U8.21-201ENST00000459536 136 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 PTP4A1P4-201ENST00000512479 322 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXD12P35452 ACA59.1-201ENST00000515966 143 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 RNU6-581P-201ENST00000516214 105 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AP003072.1-201ENST00000531740 145 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AC020661.2-201ENST00000560114 134 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AC109446.1-201ENST00000566172 220 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AC024153.1-201ENST00000603103 365 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 AL356280.1-201ENST00000603614 379 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 MIR7157-201ENST00000635801 60 ntBASIC3.02□□□□□ -1.93
HOXD12P35452 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD12P35452 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD12P35452 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD12P35452 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD12P35452 MTND4P27-201ENST00000450813 1354 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 AL136360.1-201ENST00000503377 1900 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD12P35452 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD12P35452 Y_RNA.132-201ENST00000363421 102 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 RNU6-527P-201ENST00000363425 104 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 RNU6-336P-201ENST00000364891 107 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 RNU1-100P-201ENST00000365255 165 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 RNU1-109P-201ENST00000383960 147 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 RNU6-890P-201ENST00000384121 107 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 MIR559-201ENST00000385188 96 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 AL590004.1-201ENST00000405321 300 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 MIR548P-201ENST00000408336 84 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 HMGN2P35-201ENST00000412164 270 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 NUP35P1-201ENST00000422734 947 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 USMG5P1-201ENST00000425964 177 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 RPL23AP50-201ENST00000434149 455 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD12P35452 DAP3P1-201ENST00000441522 278 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD12P35452 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD12P35452 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD12P35452 MIR2053-201ENST00000459295 91 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 Y_RNA.631-201ENST00000459607 101 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD12P35452 RNA5SP384-201ENST00000516615 116 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms