Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40P25942 RNU2-53P-201ENST00000516257 147 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNA5SP54-201ENST00000516951 92 ntBASIC3.24□□□□□ -1.89
CD40P25942 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.24□□□□□ -1.89
CD40P25942 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40P25942 AP003733.2-201ENST00000529409 171 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNU1-30P-201ENST00000606575 163 ntBASIC3.24□□□□□ -1.89
CD40P25942 Y_RNA.772-201ENST00000606692 102 ntBASIC3.24□□□□□ -1.89
CD40P25942 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CD40P25942 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
CD40P25942 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD40P25942 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.23□□□□□ -1.89
CD40P25942 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 OR56A5-201ENST00000340110 738 ntBASIC3.23□□□□□ -1.89
CD40P25942 snoU2_19.1-201ENST00000362361 80 ntBASIC3.23□□□□□ -1.89
CD40P25942 RNU6-280P-201ENST00000364145 104 ntBASIC3.23□□□□□ -1.89
CD40P25942 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.23□□□□□ -1.89
CD40P25942 Y_RNA.376-201ENST00000365638 108 ntBASIC3.23□□□□□ -1.89
CD40P25942 RNA5SP424-201ENST00000390988 115 ntBASIC3.23□□□□□ -1.89
CD40P25942 MIR1302-6-201ENST00000408466 90 ntBASIC3.23□□□□□ -1.89
CD40P25942 Y_RNA.618-201ENST00000410949 107 ntBASIC3.23□□□□□ -1.89
CD40P25942 RNA5SP306-201ENST00000411087 107 ntBASIC3.23□□□□□ -1.89
CD40P25942 RPL21P38-201ENST00000418090 167 ntBASIC3.23□□□□□ -1.89
CD40P25942 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40P25942 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40P25942 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CD40P25942 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40P25942 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40P25942 RN7SKP18-201ENST00000516005 275 ntBASIC3.23□□□□□ -1.89
CD40P25942 RNA5SP208-201ENST00000516156 78 ntBASIC3.23□□□□□ -1.89
CD40P25942 Y_RNA.668-201ENST00000516233 93 ntBASIC3.23□□□□□ -1.89
CD40P25942 Y_RNA.713-201ENST00000517013 96 ntBASIC3.23□□□□□ -1.89
CD40P25942 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.23□□□□□ -1.89
CD40P25942 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40P25942 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40P25942 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40P25942 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.23□□□□□ -1.89
CD40P25942 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD40P25942 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.23□□□□□ -1.89
CD40P25942 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CD40P25942 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CD40P25942 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CD40P25942 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CD40P25942 RNU4-15P-201ENST00000362613 141 ntBASIC3.22□□□□□ -1.89
CD40P25942 Y_RNA.143-201ENST00000363520 106 ntBASIC3.22□□□□□ -1.89
CD40P25942 RNU6-1083P-201ENST00000384022 107 ntBASIC3.22□□□□□ -1.89
CD40P25942 Y_RNA.483-201ENST00000384380 101 ntBASIC3.22□□□□□ -1.89
CD40P25942 MT-TW-201ENST00000387382 68 ntBASIC3.22□□□□□ -1.89
CD40P25942 AC017083.1-201ENST00000428093 483 ntBASIC3.22□□□□□ -1.89
CD40P25942 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.22□□□□□ -1.89
CD40P25942 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.22□□□□□ -1.89
CD40P25942 AC145146.1-201ENST00000496370 254 ntBASIC3.22□□□□□ -1.89
CD40P25942 SNORA25.14-201ENST00000516481 132 ntBASIC3.22□□□□□ -1.89
CD40P25942 RN7SKP49-201ENST00000516675 260 ntBASIC3.22□□□□□ -1.89
CD40P25942 RNU6-570P-201ENST00000517051 105 ntBASIC3.22□□□□□ -1.89
CD40P25942 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.22□□□□□ -1.89
CD40P25942 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.22□□□□□ -1.89
CD40P25942 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CD40P25942 AC244505.7-201ENST00000599675 272 ntBASIC3.22□□□□□ -1.89
CD40P25942 AC005520.5-201ENST00000613926 164 ntBASIC3.22□□□□□ -1.89
CD40P25942 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.22□□□□□ -1.89
CD40P25942 MIR376A1-201ENST00000616574 68 ntBASIC3.22□□□□□ -1.89
CD40P25942 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
CD40P25942 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.22□□□□□ -1.89
CD40P25942 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.22□□□□□ -1.89
CD40P25942 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.22□□□□□ -1.89
CD40P25942 MAPK10-253ENST00000641010 4072 ntBASIC3.22□□□□□ -1.89
CD40P25942 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CD40P25942 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CD40P25942 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.21□□□□□ -1.89
CD40P25942 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.21□□□□□ -1.9
CD40P25942 SNORA71.3-201ENST00000362582 128 ntBASIC3.21□□□□□ -1.9
CD40P25942 RNA5SP51-201ENST00000364750 119 ntBASIC3.21□□□□□ -1.9
CD40P25942 Y_RNA.288-201ENST00000364854 92 ntBASIC3.21□□□□□ -1.9
CD40P25942 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD40P25942 MIR329-1-201ENST00000385028 80 ntBASIC3.21□□□□□ -1.9
CD40P25942 RNA5SP201-201ENST00000410316 124 ntBASIC3.21□□□□□ -1.9
CD40P25942 RNU2-20P-201ENST00000410425 191 ntBASIC3.21□□□□□ -1.9
CD40P25942 ATP5A1P2-201ENST00000412323 255 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
CD40P25942 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC007215.1-201ENST00000464893 276 ntBASIC3.21□□□□□ -1.9
CD40P25942 RPL31P41-201ENST00000477967 372 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC098869.1-201ENST00000481627 292 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC103975.1-201ENST00000482506 483 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC025465.3-201ENST00000510570 311 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC104619.4-201ENST00000510773 249 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
CD40P25942 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.21□□□□□ -1.9
CD40P25942 AC136932.1-201ENST00000574771 208 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC103810.1-201ENST00000579873 453 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC110741.2-201ENST00000605278 268 ntBASIC3.21□□□□□ -1.9
CD40P25942 AC062037.2-201ENST00000610137 73 ntBASIC3.21□□□□□ -1.9
CD40P25942 PCGEM1.1-201ENST00000613431 131 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms