Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TNFSF4P23510 RNU1-75P-201ENST00000347264 129 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 SNORA63.1-201ENST00000362493 131 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 RNA5SP197-201ENST00000363357 119 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 RNU6-310P-201ENST00000384655 107 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 SNORA41-201ENST00000384675 132 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 RNU6-55P-201ENST00000411092 107 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF4P23510 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF4P23510 AC011816.1-201ENST00000441346 546 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 SNORD19B-201ENST00000459623 84 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF4P23510 AC087477.1-201ENST00000465747 340 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFSF4P23510 AC074250.1-201ENST00000511117 192 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 Y_RNA.718-201ENST00000517110 102 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFSF4P23510 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF4P23510 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF4P23510 AL162713.1-201ENST00000604480 262 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 PCGEM1.1-201ENST00000613431 131 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF4P23510 AC000403.1-201ENST00000613696 3585 ntBASIC2.84□□□□□ -1.95
TNFSF4P23510 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TNFSF4P23510 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TNFSF4P23510 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF4P23510 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.83□□□□□ -1.96
TNFSF4P23510 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF4P23510 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF4P23510 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF4P23510 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.83□□□□□ -1.96
TNFSF4P23510 RNU4-79P-201ENST00000362764 141 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 RNU6-797P-201ENST00000363101 109 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 U3.9-201ENST00000363823 204 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 SNORD115-32-201ENST00000364079 82 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF4P23510 MIR490-201ENST00000384865 128 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 SNORA46.1-201ENST00000391069 153 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 MIR208B-201ENST00000401172 77 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 Y_RNA.646-201ENST00000410980 101 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 CBX3P6-201ENST00000430257 527 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 RPL23AP50-201ENST00000434149 455 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 OR2AQ1P-201ENST00000451972 200 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 RNA5SP384-201ENST00000516615 116 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 RNU6-1213P-201ENST00000517075 94 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.83□□□□□ -1.96
TNFSF4P23510 AL590705.4-201ENST00000532209 134 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 AC018630.3-201ENST00000542637 96 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF4P23510 uc_338.1-201ENST00000612113 180 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 AC126177.8-201ENST00000618339 1015 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 MTND4LP32-201ENST00000636111 270 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF4P23510 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
TNFSF4P23510 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TNFSF4P23510 SNORD46.1-201ENST00000364139 104 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 SNORD116-29-201ENST00000384516 83 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RNU6-331P-201ENST00000384724 107 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 MIR561-201ENST00000385216 97 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 SNORA75.6-201ENST00000391318 127 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 Y_RNA.597-201ENST00000410463 100 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFSF4P23510 AC009969.1-201ENST00000438726 172 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 ELOCP24-201ENST00000456370 334 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RPL30P15-201ENST00000457129 321 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 snoU13.6-201ENST00000458785 104 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 snoU13.30-201ENST00000458951 104 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RNU7-26P-201ENST00000458980 63 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RPS29P2-201ENST00000479278 136 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RPL30P10-201ENST00000488148 337 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 AC090096.1-201ENST00000489168 390 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 AC083906.5-201ENST00000503722 328 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 SCARNA16.2-201ENST00000516520 172 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 AC068657.1-201ENST00000520807 306 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF4P23510 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF4P23510 AC023043.3-201ENST00000593113 385 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 RMST_6.1-201ENST00000611980 203 ntBASIC2.82□□□□□ -1.96
TNFSF4P23510 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF4P23510 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF4P23510 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF4P23510 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
TNFSF4P23510 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.81□□□□□ -1.96
TNFSF4P23510 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF4P23510 AL356274.2-201ENST00000624379 3752 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TNFSF4P23510 Y_RNA.61-201ENST00000362835 102 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 SNORA38-201ENST00000363946 132 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AP002088.1-201ENST00000382740 395 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF4P23510 AL031121.1-201ENST00000406553 254 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AC093578.1-201ENST00000415219 368 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF4P23510 BX679664.1-201ENST00000434429 253 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 CST9LP2-201ENST00000437612 320 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AP000705.1-201ENST00000454567 350 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.81□□□□□ -1.96
TNFSF4P23510 RN7SL807P-201ENST00000470923 297 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms