Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC026241.1-201ENST00000517873 2142 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.85□□□□□ -1.63
COL9A1P20849 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.85□□□□□ -1.63
COL9A1P20849 Y_RNA.40-201ENST00000362645 93 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 RNY1P7-201ENST00000384743 110 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 RN7SKP16-201ENST00000410180 299 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AL500522.2-201ENST00000448562 343 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AL441985.1-201ENST00000457727 251 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AP001486.1-201ENST00000463339 476 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AC084357.1-201ENST00000473404 255 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AC010598.1-201ENST00000510378 103 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 AC011602.1-201ENST00000546484 331 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL9A1P20849 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL9A1P20849 AC007656.2-201ENST00000624902 4547 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.85□□□□□ -1.63
COL9A1P20849 AC063976.2-201ENST00000425667 3556 ntBASIC4.85□□□□□ -1.63
COL9A1P20849 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.85□□□□□ -1.63
COL9A1P20849 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL9A1P20849 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL9A1P20849 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
COL9A1P20849 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.84□□□□□ -1.63
COL9A1P20849 AL356292.1-201ENST00000283110 373 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 SNORA63.5-201ENST00000363548 123 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 UBBP2-201ENST00000376781 231 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 RNU1-82P-201ENST00000390851 165 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.84□□□□□ -1.63
COL9A1P20849 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.84□□□□□ -1.63
COL9A1P20849 AL353705.1-201ENST00000433468 480 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 AL162151.2-201ENST00000448875 158 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 RNA5SP236-201ENST00000516169 116 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 RNU6-365P-201ENST00000517113 106 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.84□□□□□ -1.63
COL9A1P20849 AL121932.1-201ENST00000605542 214 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 SNORD115-40-201ENST00000606510 82 ntBASIC4.84□□□□□ -1.63
COL9A1P20849 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.84□□□□□ -1.63
COL9A1P20849 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL9A1P20849 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.84□□□□□ -1.63
COL9A1P20849 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL9A1P20849 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL9A1P20849 AL136360.1-201ENST00000503377 1900 ntBASIC4.84□□□□□ -1.64
COL9A1P20849 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
COL9A1P20849 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
COL9A1P20849 Y_RNA.78-201ENST00000362970 110 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 RNU1-83P-201ENST00000363426 164 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 RNU4-13P-201ENST00000364019 141 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 RNU6-1138P-201ENST00000365359 106 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL9A1P20849 AL590004.2-201ENST00000404787 371 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 AC007064.1-201ENST00000412238 351 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 MTATP8P2-201ENST00000435212 202 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 SNORD19.2-201ENST00000516978 73 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 HSPE1P18-201ENST00000517602 280 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.83□□□□□ -1.64
COL9A1P20849 RN7SL703P-201ENST00000578485 302 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 AL035470.1-201ENST00000622571 220 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL9A1P20849 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.83□□□□□ -1.64
COL9A1P20849 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL9A1P20849 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.82□□□□□ -1.64
COL9A1P20849 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL9A1P20849 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL9A1P20849 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.82□□□□□ -1.64
COL9A1P20849 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COL9A1P20849 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
COL9A1P20849 ADAM5-202ENST00000399789 1942 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL9A1P20849 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
COL9A1P20849 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COL9A1P20849 MIR383-201ENST00000362257 73 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 SNORA73.2-201ENST00000364946 201 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 SNORA51.4-201ENST00000364993 124 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 Z98745.1-201ENST00000402553 494 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.82□□□□□ -1.64
COL9A1P20849 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.82□□□□□ -1.64
COL9A1P20849 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 AC105129.1-201ENST00000560250 297 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 AC093249.4-201ENST00000564755 259 ntBASIC4.82□□□□□ -1.64
COL9A1P20849 RPL23AP91-201ENST00000569211 455 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms