Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC010285.1-201ENST00000470580 392 ntBASIC5.49□□□□□ -1.53
CD44P16070 AC097484.1-201ENST00000471148 389 ntBASIC5.49□□□□□ -1.53
CD44P16070 RNA5SP43-201ENST00000516559 110 ntBASIC5.49□□□□□ -1.53
CD44P16070 RNU4-60P-201ENST00000517239 135 ntBASIC5.49□□□□□ -1.53
CD44P16070 AC096720.1-201ENST00000604441 183 ntBASIC5.49□□□□□ -1.53
CD44P16070 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CD44P16070 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.49□□□□□ -1.53
CD44P16070 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CD44P16070 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CD44P16070 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD44P16070 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CD44P16070 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD44P16070 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.48□□□□□ -1.53
CD44P16070 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.48□□□□□ -1.53
CD44P16070 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 RNU6-743P-201ENST00000364151 106 ntBASIC5.48□□□□□ -1.53
CD44P16070 RNU6-171P-201ENST00000384354 107 ntBASIC5.48□□□□□ -1.53
CD44P16070 SNORA12-201ENST00000391162 147 ntBASIC5.48□□□□□ -1.53
CD44P16070 RN7SL222P-201ENST00000476452 299 ntBASIC5.48□□□□□ -1.53
CD44P16070 RPS27P22-201ENST00000478056 241 ntBASIC5.48□□□□□ -1.53
CD44P16070 RPL30P14-201ENST00000482744 348 ntBASIC5.48□□□□□ -1.53
CD44P16070 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 IGHVII-40-1-201ENST00000517316 58 ntBASIC5.48□□□□□ -1.53
CD44P16070 BNIP3P1-201ENST00000547295 580 ntBASIC5.48□□□□□ -1.53
CD44P16070 MIR3936-201ENST00000584304 110 ntBASIC5.48□□□□□ -1.53
CD44P16070 RN7SL435P-201ENST00000584418 282 ntBASIC5.48□□□□□ -1.53
CD44P16070 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.48□□□□□ -1.53
CD44P16070 AC091979.2-201ENST00000607514 214 ntBASIC5.48□□□□□ -1.53
CD44P16070 AC103810.7-201ENST00000607821 91 ntBASIC5.48□□□□□ -1.53
CD44P16070 AC093831.2-201ENST00000624393 3427 ntBASIC5.48□□□□□ -1.53
CD44P16070 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.48□□□□□ -1.53
CD44P16070 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CD44P16070 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CD44P16070 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CD44P16070 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD44P16070 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CD44P16070 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CD44P16070 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.47□□□□□ -1.53
CD44P16070 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 RNU6-1094P-201ENST00000362416 104 ntBASIC5.47□□□□□ -1.53
CD44P16070 MIR1283-1-201ENST00000408494 87 ntBASIC5.47□□□□□ -1.53
CD44P16070 AL513477.1-202ENST00000417061 214 ntBASIC5.47□□□□□ -1.53
CD44P16070 RPL30P4-201ENST00000429309 333 ntBASIC5.47□□□□□ -1.53
CD44P16070 YME1L1P1-201ENST00000429435 297 ntBASIC5.47□□□□□ -1.53
CD44P16070 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.47□□□□□ -1.53
CD44P16070 RAB6C-AS1-202ENST00000433431 123 ntBASIC5.47□□□□□ -1.53
CD44P16070 PPBPP1-201ENST00000510807 373 ntBASIC5.47□□□□□ -1.53
CD44P16070 ATP5LP3-201ENST00000514223 304 ntBASIC5.47□□□□□ -1.53
CD44P16070 RN7SKP276-201ENST00000516242 268 ntBASIC5.47□□□□□ -1.53
CD44P16070 RNU6-1231P-201ENST00000517185 103 ntBASIC5.47□□□□□ -1.53
CD44P16070 AL022401.1-201ENST00000619498 108 ntBASIC5.47□□□□□ -1.53
CD44P16070 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD44P16070 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
CD44P16070 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CD44P16070 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.46□□□□□ -1.54
CD44P16070 RNU1-22P-201ENST00000363334 158 ntBASIC5.46□□□□□ -1.54
CD44P16070 MIR519C-201ENST00000385053 87 ntBASIC5.46□□□□□ -1.54
CD44P16070 RNU6-57P-201ENST00000411348 103 ntBASIC5.46□□□□□ -1.54
CD44P16070 AL035398.1-201ENST00000430869 322 ntBASIC5.46□□□□□ -1.54
CD44P16070 RN7SL517P-201ENST00000462240 305 ntBASIC5.46□□□□□ -1.54
CD44P16070 AC010401.1-201ENST00000463867 348 ntBASIC5.46□□□□□ -1.54
CD44P16070 KRTAP13-6P-201ENST00000508999 371 ntBASIC5.46□□□□□ -1.54
CD44P16070 RNU6-91P-201ENST00000607774 107 ntBASIC5.46□□□□□ -1.54
CD44P16070 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.46□□□□□ -1.54
CD44P16070 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CD44P16070 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.46□□□□□ -1.54
CD44P16070 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CD44P16070 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD44P16070 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD44P16070 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
CD44P16070 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.45□□□□□ -1.54
CD44P16070 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CD44P16070 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CD44P16070 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.45□□□□□ -1.54
CD44P16070 MIR1286-201ENST00000408112 78 ntBASIC5.45□□□□□ -1.54
CD44P16070 SNORA11.5-201ENST00000408163 128 ntBASIC5.45□□□□□ -1.54
CD44P16070 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.45□□□□□ -1.54
CD44P16070 RPS29P20-201ENST00000489592 171 ntBASIC5.45□□□□□ -1.54
CD44P16070 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.45□□□□□ -1.54
CD44P16070 MIR4691-201ENST00000583764 85 ntBASIC5.45□□□□□ -1.54
CD44P16070 SNRPGP15-201ENST00000600149 222 ntBASIC5.45□□□□□ -1.54
CD44P16070 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.45□□□□□ -1.54
CD44P16070 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD44P16070 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms