Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PTP4A1P4-201ENST00000512479 322 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.82□□□□□ -1.96
MMP3P08254 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.82□□□□□ -1.96
MMP3P08254 AC126177.8-201ENST00000618339 1015 ntBASIC2.82□□□□□ -1.96
MMP3P08254 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AL160413.1-201ENST00000622780 310 ntBASIC2.82□□□□□ -1.96
MMP3P08254 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
MMP3P08254 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MMP3P08254 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
MMP3P08254 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MMP3P08254 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MMP3P08254 AC010680.1-201ENST00000590024 3590 ntBASIC2.81□□□□□ -1.96
MMP3P08254 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
MMP3P08254 SNORD56.1-201ENST00000362913 68 ntBASIC2.81□□□□□ -1.96
MMP3P08254 RNU6-105P-201ENST00000363909 104 ntBASIC2.81□□□□□ -1.96
MMP3P08254 Y_RNA.460-201ENST00000384255 102 ntBASIC2.81□□□□□ -1.96
MMP3P08254 SNORA75.4-201ENST00000391278 119 ntBASIC2.81□□□□□ -1.96
MMP3P08254 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MMP3P08254 RNU6-1050P-201ENST00000410388 107 ntBASIC2.81□□□□□ -1.96
MMP3P08254 Y_RNA.646-201ENST00000410980 101 ntBASIC2.81□□□□□ -1.96
MMP3P08254 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.81□□□□□ -1.96
MMP3P08254 RPS15AP10-201ENST00000432472 382 ntBASIC2.81□□□□□ -1.96
MMP3P08254 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MMP3P08254 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.81□□□□□ -1.96
MMP3P08254 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.81□□□□□ -1.96
MMP3P08254 MTCYBP40-201ENST00000509390 1135 ntBASIC2.81□□□□□ -1.96
MMP3P08254 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.81□□□□□ -1.96
MMP3P08254 ACA59.2-201ENST00000517061 156 ntBASIC2.81□□□□□ -1.96
MMP3P08254 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MMP3P08254 AC022634.1-201ENST00000520765 532 ntBASIC2.81□□□□□ -1.96
MMP3P08254 DNAJC8P1-201ENST00000554535 372 ntBASIC2.81□□□□□ -1.96
MMP3P08254 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.81□□□□□ -1.96
MMP3P08254 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MMP3P08254 AC018462.2-201ENST00000605375 395 ntBASIC2.81□□□□□ -1.96
MMP3P08254 AP000654.2-201ENST00000605633 586 ntBASIC2.81□□□□□ -1.96
MMP3P08254 AC124303.1-201ENST00000605703 360 ntBASIC2.81□□□□□ -1.96
MMP3P08254 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.81□□□□□ -1.96
MMP3P08254 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MMP3P08254 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
MMP3P08254 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MMP3P08254 AC091564.4-201ENST00000533934 2194 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
MMP3P08254 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MMP3P08254 CD24P4-201ENST00000382840 243 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-842P-201ENST00000384269 107 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-933P-201ENST00000384424 107 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-310P-201ENST00000384655 107 ntBASIC2.8□□□□□ -1.96
MMP3P08254 MIR521-1-201ENST00000384902 87 ntBASIC2.8□□□□□ -1.96
MMP3P08254 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-1140P-201ENST00000410517 106 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU4-53P-201ENST00000410828 140 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-293P-201ENST00000411259 106 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RPS20P15-201ENST00000412792 311 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AF228730.4-201ENST00000421457 183 ntBASIC2.8□□□□□ -1.96
MMP3P08254 SAR1AP4-201ENST00000429225 591 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.8□□□□□ -1.96
MMP3P08254 AL133396.1-201ENST00000432048 687 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AC236972.2-201ENST00000434979 310 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AC007677.1-201ENST00000445757 515 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AC013470.1-201ENST00000453438 462 ntBASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-1037P-201ENST00000459571 107 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
MMP3P08254 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.8□□□□□ -1.96
MMP3P08254 RNU6-120P-201ENST00000516077 103 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AC109479.2-201ENST00000517842 174 ntBASIC2.8□□□□□ -1.96
MMP3P08254 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.8□□□□□ -1.96
MMP3P08254 AC109446.1-201ENST00000566172 220 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AL133215.3-201ENST00000609801 448 ntBASIC2.8□□□□□ -1.96
MMP3P08254 AC002064.3-201ENST00000623448 346 ntBASIC2.8□□□□□ -1.96
MMP3P08254 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
MMP3P08254 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.8□□□□□ -1.96
MMP3P08254 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.79□□□□□ -1.96
MMP3P08254 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MMP3P08254 Y_RNA.48-201ENST00000362710 103 ntBASIC2.79□□□□□ -1.96
MMP3P08254 Y_RNA.138-201ENST00000363462 102 ntBASIC2.79□□□□□ -1.96
MMP3P08254 RNU6-1027P-201ENST00000383998 107 ntBASIC2.79□□□□□ -1.96
MMP3P08254 RNU6-692P-201ENST00000384496 107 ntBASIC2.79□□□□□ -1.96
MMP3P08254 RNU6-331P-201ENST00000384724 107 ntBASIC2.79□□□□□ -1.96
MMP3P08254 RNU6-1106P-201ENST00000390845 107 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
MMP3P08254 MTCO2P27-201ENST00000420740 428 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
MMP3P08254 RPL23AP58-201ENST00000440453 469 ntBASIC2.79□□□□□ -1.96
MMP3P08254 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.79□□□□□ -1.96
MMP3P08254 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.79□□□□□ -1.96
MMP3P08254 MED28P2-201ENST00000475771 317 ntBASIC2.79□□□□□ -1.96
MMP3P08254 FO393415.2-201ENST00000480085 343 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AC005741.1-201ENST00000511094 432 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.79□□□□□ -1.96
MMP3P08254 RNA5SP384-201ENST00000516615 116 ntBASIC2.79□□□□□ -1.96
MMP3P08254 RNU6-612P-201ENST00000516909 102 ntBASIC2.79□□□□□ -1.96
MMP3P08254 Y_RNA.708-201ENST00000516950 96 ntBASIC2.79□□□□□ -1.96
MMP3P08254 MIR4524B-201ENST00000581569 115 ntBASIC2.79□□□□□ -1.96
MMP3P08254 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.79□□□□□ -1.96
MMP3P08254 AC044792.1-201ENST00000593294 196 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AC011494.1-201ENST00000596454 237 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AP000787.2-201ENST00000604432 568 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AC080078.3-201ENST00000605407 463 ntBASIC2.79□□□□□ -1.96
MMP3P08254 AC004852.3-201ENST00000614131 326 ntBASIC2.79□□□□□ -1.96
MMP3P08254 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 260.7 ms