Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC005609.4-201ENST00000625071 447 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.1-201ENST00000352915 104 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.296-201ENST00000364930 108 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 SNORD116-9-201ENST00000384000 95 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 SNORD116-3-201ENST00000384287 95 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 SNORD116-7-201ENST00000384404 95 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 SNORD116-5-201ENST00000384462 95 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 SNORA12-201ENST00000391162 147 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 MIR1283-2-201ENST00000408621 87 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL139156.1-201ENST00000412785 841 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL117339.3-201ENST00000418733 162 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 BX510359.4-201ENST00000423750 193 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AC010975.2-201ENST00000427781 588 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL606489.2-201ENST00000433886 234 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 RNU7-167P-201ENST00000459160 62 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 RPL23AP42-201ENST00000471152 471 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 TRBV12-1-201ENST00000479785 344 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 RPL21P99-201ENST00000480369 423 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL163973.1-201ENST00000484753 577 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 RPL9P6-201ENST00000492764 598 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 PTP4A1P4-201ENST00000512479 322 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 MTND3P5-201ENST00000512798 333 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 MIR449C-201ENST00000516047 92 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 IGKV3-31-201ENST00000523109 329 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AC018630.3-201ENST00000542637 96 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 MIR1273D-201ENST00000577266 86 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 MTND1P15-201ENST00000579262 949 ntBASIC1.39□□□□□ -2.19
HLA-DQA1P01909 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DQA1P01909 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 SNORD116-1-201ENST00000384335 95 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.582-201ENST00000391023 95 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 RPS29P13-201ENST00000402041 169 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AL445685.2-201ENST00000422551 342 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 DPH3P2-201ENST00000422618 250 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AL139415.2-201ENST00000431968 163 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 HMGN2P3-201ENST00000433603 273 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 HMGN2P5-201ENST00000436882 273 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 RPL31P3-201ENST00000458430 332 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC108078.1-201ENST00000508073 725 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC091133.4-201ENST00000511142 308 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 SNORA31.16-201ENST00000516773 139 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 COPS8P3-201ENST00000526024 482 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 DEFB122-202ENST00000569013 197 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 MIR4419B-201ENST00000577260 68 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC010928.2-201ENST00000588017 287 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 BNIP3P16-201ENST00000589779 534 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 RNU6-85P-201ENST00000605989 107 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 HULC.1-201ENST00000612720 240 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.38□□□□□ -2.19
HLA-DQA1P01909 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DQA1P01909 RNU6-1164P-201ENST00000364428 107 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.255-201ENST00000364581 97 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 SNORD32A-201ENST00000364805 84 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 SNORD48-201ENST00000364953 64 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.409-201ENST00000383990 98 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 SNORA64-201ENST00000384674 134 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 BTF3L4P2-201ENST00000392798 346 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AL512604.1-201ENST00000404812 257 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 SNORA3.2-201ENST00000408221 125 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 RN7SKP223-201ENST00000410582 62 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC244670.1-201ENST00000436879 112 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 DNAJC19P4-201ENST00000440115 345 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC145146.1-201ENST00000496370 254 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 HMGB1P29-201ENST00000505659 499 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AK3P2-201ENST00000507976 429 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms