Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL670379.10-201ENST00000604330 253 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 AL670379.9-201ENST00000605428 253 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC008536.2-201ENST00000607284 349 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC017083.3-201ENST00000609955 700 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
CTDNEP1O95476 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RMST_7.1-201ENST00000621935 268 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 MIR7843-201ENST00000622274 79 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CTDNEP1O95476 SNORD70.1-201ENST00000391007 85 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 RNU6-780P-201ENST00000391030 104 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 CALM2P3-201ENST00000400429 449 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AL356432.1-201ENST00000405809 419 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 RNU4-46P-201ENST00000410818 138 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 AL606489.2-201ENST00000433886 234 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 RPL23AP3-201ENST00000453844 468 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 RNU7-180P-201ENST00000459240 63 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 GMFBP1-201ENST00000467831 427 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC023790.1-201ENST00000482174 347 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AP001025.1-201ENST00000486139 332 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC079382.1-201ENST00000493346 557 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 CCDC34P1-201ENST00000507441 517 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CTDNEP1O95476 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC104136.1-201ENST00000512969 394 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 RNU2-69P-201ENST00000516061 100 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.66□□□□□ -2.14
CTDNEP1O95476 BNIP3P6-201ENST00000549284 499 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 DEFB122-202ENST00000569013 197 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 MIR5692A1-201ENST00000580523 69 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 MIR5739-201ENST00000619803 80 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 AC005609.4-201ENST00000625071 447 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 OR5AK4P-201ENST00000635912 903 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 ZNF702P-202ENST00000434269 1966 ntBASIC1.66□□□□□ -2.14
CTDNEP1O95476 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CTDNEP1O95476 RNA5SP240-201ENST00000365355 128 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 RNU6-996P-201ENST00000365438 107 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC009238.1-201ENST00000442165 424 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.65□□□□□ -2.15
CTDNEP1O95476 RPL7P12-201ENST00000446719 750 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC009237.6-201ENST00000446969 424 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.65□□□□□ -2.15
CTDNEP1O95476 SCARNA18-201ENST00000459004 134 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 RNU7-63P-201ENST00000459054 62 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 MED28P2-201ENST00000475771 317 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC074344.1-201ENST00000512823 224 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC105417.1-201ENST00000514691 285 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 SMURF2P1-201ENST00000514992 481 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 RNU5B-3P-201ENST00000516601 115 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 SNORA43.2-201ENST00000516652 128 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 RNA5SP137-201ENST00000516833 135 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AP004607.1-201ENST00000524456 203 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.65□□□□□ -2.15
CTDNEP1O95476 HIF1AP1-201ENST00000553642 175 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.65□□□□□ -2.15
CTDNEP1O95476 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 MTCO3P23-201ENST00000561363 289 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.65□□□□□ -2.15
CTDNEP1O95476 MIR4424-201ENST00000585257 86 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC078795.2-201ENST00000602835 1252 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC123912.5-201ENST00000605470 343 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AP001330.5-201ENST00000607176 411 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AC009233.1-201ENST00000616477 371 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 AL354950.2-201ENST00000617939 290 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 MIR6863-201ENST00000636112 90 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 RBBP8P1-201ENST00000449447 1844 ntBASIC1.65□□□□□ -2.15
CTDNEP1O95476 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CTDNEP1O95476 RNU6-858P-201ENST00000362436 107 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 RNU2-29P-201ENST00000410423 189 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 RN7SKP51-201ENST00000410781 304 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 SNORD56-201ENST00000413522 71 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CTDNEP1O95476 TOMM20P4-201ENST00000427861 435 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 HMGB1P18-201ENST00000438801 619 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AL441985.1-201ENST00000457727 251 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC112771.1-201ENST00000463581 102 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 FO393415.2-201ENST00000480085 343 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 HMGB1P30-201ENST00000492455 606 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC010493.1-201ENST00000513479 292 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 SNORA40.12-201ENST00000516329 111 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 RNU6-548P-201ENST00000517083 115 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 SNORA25.17-201ENST00000517184 124 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.64□□□□□ -2.15
CTDNEP1O95476 AC104383.1-201ENST00000530297 370 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms