Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SAR1AP2-201ENST00000392696 594 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 MTCYBP2-201ENST00000407745 171 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 RNA5SP229-201ENST00000410809 99 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS4BO75351 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS4BO75351 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS4BO75351 CHEK2P4-201ENST00000450340 246 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS4BO75351 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS4BO75351 AC093663.1-201ENST00000497190 394 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS4BO75351 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS4BO75351 RNU6-1046P-201ENST00000516538 107 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AC009812.2-201ENST00000517657 457 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS4BO75351 AC010653.1-201ENST00000571108 881 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AC019159.1-201ENST00000605094 187 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 AC087588.2-201ENST00000617667 426 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 MIR4272-201ENST00000635924 64 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
VPS4BO75351 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS4BO75351 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS4BO75351 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
VPS4BO75351 Y_RNA.39-201ENST00000362620 98 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 SNORD56.1-201ENST00000362913 68 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 Y_RNA.123-201ENST00000363338 102 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 SNORA5B-201ENST00000363786 132 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 RNU4-42P-201ENST00000364738 142 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 RNU6-301P-201ENST00000384277 107 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 RNU6-1105P-201ENST00000384774 107 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 MIR548F4-201ENST00000408515 105 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 RNA5SP390-201ENST00000410191 113 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 MTCYBP10-201ENST00000424905 650 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS4BO75351 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS4BO75351 RN7SKP210-201ENST00000459176 261 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AC015911.1-201ENST00000495111 156 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS4BO75351 RNU7-4P-201ENST00000516961 62 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS4BO75351 AC016256.1-201ENST00000547971 354 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AC004584.2-201ENST00000570407 410 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AC104581.2-201ENST00000572227 430 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 MIR5004-201ENST00000579078 107 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AL133393.1-201ENST00000603277 287 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 AL162373.1-201ENST00000620433 407 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 MTND5P27-201ENST00000428871 1720 ntBASIC3.15□□□□□ -1.91
VPS4BO75351 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS4BO75351 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VPS4BO75351 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS4BO75351 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AC103988.1-201ENST00000566382 2177 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 MTND5P16-201ENST00000460269 1703 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 MIR422A-201ENST00000362286 90 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 RNU6-1245P-201ENST00000411130 106 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AC096649.2-201ENST00000416186 393 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS4BO75351 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS4BO75351 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 MTND3P2-201ENST00000438452 342 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS4BO75351 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS4BO75351 RNU6-764P-201ENST00000516396 105 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 SNORA40.14-201ENST00000516543 86 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 RNU5B-3P-201ENST00000516601 115 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AL590705.4-201ENST00000532209 134 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AC022080.3-201ENST00000544433 482 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 AL117187.1-201ENST00000555482 181 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS4BO75351 AC008121.3-201ENST00000618726 433 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 SNORA43.4-201ENST00000629559 138 ntBASIC3.14□□□□□ -1.91
VPS4BO75351 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS4BO75351 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS4BO75351 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VPS4BO75351 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS4BO75351 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS4BO75351 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS4BO75351 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS4BO75351 SNORA80A-201ENST00000363922 136 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 Y_RNA.314-201ENST00000365114 102 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 Y_RNA.459-201ENST00000384251 102 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 RNU6-750P-201ENST00000390946 107 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 RNA5SP494-201ENST00000410653 129 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 EIF1AXP1-201ENST00000419267 435 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 UQCRHP3-201ENST00000451503 251 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 AL353752.1-201ENST00000454946 260 ntBASIC3.13□□□□□ -1.91
VPS4BO75351 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms