Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 HSFY8P-201ENST00000437934 318 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AL121601.2-201ENST00000438019 707 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.43□□□□□ -2.18
NPHP4O75161 HSFY5P-201ENST00000453726 309 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.43□□□□□ -2.18
NPHP4O75161 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.43□□□□□ -2.18
NPHP4O75161 MIR548AC-201ENST00000585049 88 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AL078605.1-201ENST00000603529 500 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AL590095.2-201ENST00000604136 117 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AL031775.1-201ENST00000607014 887 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AC063943.3-201ENST00000615562 356 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AL132822.1-201ENST00000617063 513 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AC007742.2-201ENST00000618226 398 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 U6.42-201ENST00000618440 107 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.43□□□□□ -2.18
NPHP4O75161 OR4G3P-201ENST00000633500 913 ntBASIC1.43□□□□□ -2.18
NPHP4O75161 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
NPHP4O75161 AC073343.1-201ENST00000328239 651 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 Y_RNA.68-201ENST00000362881 102 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 SNORD56.1-201ENST00000362913 68 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 SNORD115.1-201ENST00000391109 76 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 RPS3AP36-201ENST00000398190 775 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 RNA5SP111-201ENST00000411386 101 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 AC098592.1-201ENST00000419352 333 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 MTCO3P5-201ENST00000433620 714 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.42□□□□□ -2.18
NPHP4O75161 snoU109.1-201ENST00000459339 135 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
NPHP4O75161 RNU1-86P-201ENST00000516108 154 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 RNU1-107P-201ENST00000516617 154 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 RNU6-1220P-201ENST00000517126 108 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 ELOCP32-201ENST00000548625 324 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 AC012065.4-201ENST00000602445 679 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 AL138889.2-201ENST00000603883 242 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 AL050343.2-201ENST00000607338 280 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 AC091304.6-201ENST00000619761 202 ntBASIC1.42□□□□□ -2.18
NPHP4O75161 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
NPHP4O75161 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NPHP4O75161 Y_RNA.115-201ENST00000363272 98 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 RNU6-501P-201ENST00000364072 100 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 SNORA8-201ENST00000384574 139 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 RNA5SP212-201ENST00000391223 107 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NPHP4O75161 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NPHP4O75161 EPS15P1-201ENST00000448836 336 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 Y_RNA.681-201ENST00000516445 113 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 SNORA43.2-201ENST00000516652 128 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 AC109329.1-201ENST00000518744 317 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 HMGN1P30-201ENST00000589286 268 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 RNU6-87P-201ENST00000607561 108 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 HAUS6P2-201ENST00000433254 2404 ntBASIC1.41□□□□□ -2.18
NPHP4O75161 RNU6-1210P-201ENST00000363775 107 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 RNU6-641P-201ENST00000384006 107 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 RNU2-23P-201ENST00000410545 195 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 Y_RNA.608-201ENST00000410647 95 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 RPL21P90-201ENST00000415692 466 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 AC000111.3-201ENST00000433478 193 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 AL512286.1-201ENST00000439244 400 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 AL360271.2-201ENST00000447710 161 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.4□□□□□ -2.18
NPHP4O75161 NDUFB1P2-201ENST00000449477 176 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.4□□□□□ -2.18
NPHP4O75161 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.4□□□□□ -2.18
NPHP4O75161 PCMTD1P2-201ENST00000565017 355 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.4□□□□□ -2.18
NPHP4O75161 AC108706.1-201ENST00000611053 297 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 AL157786.1-207ENST00000627771 695 ntBASIC1.4□□□□□ -2.18
NPHP4O75161 RNU6-1164P-201ENST00000364428 107 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 SNORA40.19-201ENST00000390846 128 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 RNU6-584P-201ENST00000410350 95 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 RNU2-39P-201ENST00000410604 198 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 ELOCP4-201ENST00000420090 333 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.4□□□□□ -2.19
NPHP4O75161 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.4□□□□□ -2.19
NPHP4O75161 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.4□□□□□ -2.19
NPHP4O75161 MTCO3P9-201ENST00000506989 781 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 PTP4A1P4-201ENST00000512479 322 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 RNA5SP330-201ENST00000517096 96 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 MTND2P7-201ENST00000521337 640 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.4□□□□□ -2.19
NPHP4O75161 AC008521.1-201ENST00000587471 187 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 BNIP3P39-201ENST00000601077 554 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 AL139286.2-201ENST00000606838 396 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 AC093648.1-201ENST00000623546 606 ntBASIC1.4□□□□□ -2.19
NPHP4O75161 FARSBP1-201ENST00000435808 1778 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
NPHP4O75161 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NPHP4O75161 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NPHP4O75161 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NPHP4O75161 RNU6-371P-201ENST00000364283 108 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 RNU6-487P-201ENST00000365430 104 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
NPHP4O75161 RNU6-611P-201ENST00000384276 104 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 SNORD14D-201ENST00000384390 87 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 BTF3L4P2-201ENST00000392798 346 ntBASIC1.39□□□□□ -2.19
NPHP4O75161 CBX3P9-201ENST00000402326 552 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms