Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 RNU4-49P-201ENST00000516080 140 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 RNU6-875P-201ENST00000516488 106 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 RNU6-256P-201ENST00000516747 97 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.61□□□□□ -1.99
SYNCRIPO60506 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.61□□□□□ -1.99
SYNCRIPO60506 MIR3672-201ENST00000584290 82 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 AL138726.1-201ENST00000614873 333 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 AC010378.1-201ENST00000619270 362 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 CTSLP2-204ENST00000629029 392 ntBASIC2.61□□□□□ -1.99
SYNCRIPO60506 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SYNCRIPO60506 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
SYNCRIPO60506 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SYNCRIPO60506 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SYNCRIPO60506 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 RNU6-942P-201ENST00000363002 107 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 Y_RNA.164-201ENST00000363709 102 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 SNORD81.2-201ENST00000365153 76 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 Y_RNA.508-201ENST00000384502 114 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AL133475.1-201ENST00000404414 305 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 RNU2-41P-201ENST00000410991 178 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC022028.1-201ENST00000412054 408 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 VN1R36P-201ENST00000414936 291 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 CYCSP48-201ENST00000417124 323 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC097463.2-201ENST00000421074 142 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AL359672.1-201ENST00000442302 409 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 AMD1P1-201ENST00000457220 922 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC112771.1-201ENST00000463581 102 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 RPL7P43-201ENST00000478876 753 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 MRPL42P6-201ENST00000486397 371 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 RN7SKP24-201ENST00000515888 284 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 RNU1-104P-201ENST00000517280 175 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 AP000763.2-201ENST00000540641 163 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 MIR3942-201ENST00000585264 109 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AL158827.2-201ENST00000602494 330 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC093913.1-201ENST00000614178 329 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC104260.1-201ENST00000616660 539 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AC244517.12-201ENST00000623581 663 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 AL691447.3-201ENST00000635020 330 ntBASIC2.6□□□□□ -1.99
SYNCRIPO60506 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.6□□□□□ -1.99
SYNCRIPO60506 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SYNCRIPO60506 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 RNU6-1013P-201ENST00000384180 107 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SYNCRIPO60506 MIR450B-201ENST00000401182 78 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 MIR1287-201ENST00000408492 90 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 SNORD56-201ENST00000413522 71 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 snoU13.15-201ENST00000459407 104 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC008628.2-201ENST00000502605 298 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC108210.2-201ENST00000503681 201 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 FGF7P4-201ENST00000509595 295 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 Y_RNA.691-201ENST00000516611 103 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AP004607.1-201ENST00000524456 203 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AP005597.4-201ENST00000526762 229 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC243972.3-201ENST00000539655 198 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.59□□□□□ -1.99
SYNCRIPO60506 SCOCP1-201ENST00000554676 349 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC015712.3-201ENST00000559380 164 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC123912.5-201ENST00000605470 343 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
SYNCRIPO60506 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SYNCRIPO60506 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SYNCRIPO60506 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.59□□□□□ -2
SYNCRIPO60506 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
SYNCRIPO60506 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.58□□□□□ -2
SYNCRIPO60506 Y_RNA.4-201ENST00000362333 112 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 RNU5E-4P-201ENST00000364931 120 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 SNORA32.2-201ENST00000384049 122 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.58□□□□□ -2
SYNCRIPO60506 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.58□□□□□ -2
SYNCRIPO60506 NCOR1P3-201ENST00000420479 303 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 PGBD4P6-201ENST00000421501 610 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.58□□□□□ -2
SYNCRIPO60506 AL139109.1-201ENST00000455491 297 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.58□□□□□ -2
SYNCRIPO60506 RPL23AP45-201ENST00000476406 468 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 AC018437.1-201ENST00000492214 406 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 MTCO1P29-201ENST00000496868 288 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
SYNCRIPO60506 MTCYBP40-201ENST00000509390 1135 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 SMURF2P1-201ENST00000514992 481 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 Y_RNA.687-201ENST00000516558 91 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 RNU5B-3P-201ENST00000516601 115 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 RNU7-30P-201ENST00000516835 62 ntBASIC2.58□□□□□ -2
SYNCRIPO60506 AC109479.2-201ENST00000517842 174 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms