Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR512-1-201ENST00000384913 84 ntBASIC2.56□□□□□ -2
ZIC3O60481 U3.26-201ENST00000391236 204 ntBASIC2.56□□□□□ -2
ZIC3O60481 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.56□□□□□ -2
ZIC3O60481 AL354751.2-201ENST00000415471 210 ntBASIC2.56□□□□□ -2
ZIC3O60481 AC243428.1-201ENST00000421099 264 ntBASIC2.56□□□□□ -2
ZIC3O60481 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.56□□□□□ -2
ZIC3O60481 AC025750.2-201ENST00000442609 450 ntBASIC2.56□□□□□ -2
ZIC3O60481 AC007677.1-201ENST00000445757 515 ntBASIC2.56□□□□□ -2
ZIC3O60481 RPL39P29-201ENST00000447779 157 ntBASIC2.56□□□□□ -2
ZIC3O60481 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC3O60481 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.56□□□□□ -2
ZIC3O60481 Y_RNA.639-201ENST00000458981 102 ntBASIC2.56□□□□□ -2
ZIC3O60481 RPS29P12-201ENST00000460178 152 ntBASIC2.56□□□□□ -2
ZIC3O60481 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
ZIC3O60481 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.56□□□□□ -2
ZIC3O60481 RNU6-1170P-201ENST00000515974 106 ntBASIC2.56□□□□□ -2
ZIC3O60481 RN7SKP132-201ENST00000516001 208 ntBASIC2.56□□□□□ -2
ZIC3O60481 RNU6-1153P-201ENST00000516760 105 ntBASIC2.56□□□□□ -2
ZIC3O60481 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC3O60481 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.56□□□□□ -2
ZIC3O60481 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZIC3O60481 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.56□□□□□ -2
ZIC3O60481 AC005899.2-201ENST00000584353 90 ntBASIC2.56□□□□□ -2
ZIC3O60481 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.56□□□□□ -2
ZIC3O60481 AL158827.2-201ENST00000602494 330 ntBASIC2.56□□□□□ -2
ZIC3O60481 AC009318.2-201ENST00000610917 651 ntBASIC2.56□□□□□ -2
ZIC3O60481 AL691447.3-201ENST00000635020 330 ntBASIC2.56□□□□□ -2
ZIC3O60481 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.56□□□□□ -2
ZIC3O60481 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ZIC3O60481 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.56□□□□□ -2
ZIC3O60481 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
ZIC3O60481 MTND5P10-201ENST00000603719 1809 ntBASIC2.56□□□□□ -2
ZIC3O60481 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.56□□□□□ -2
ZIC3O60481 AC099654.7-201ENST00000635788 2127 ntBASIC2.56□□□□□ -2
ZIC3O60481 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.55□□□□□ -2
ZIC3O60481 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZIC3O60481 Y_RNA.48-201ENST00000362710 103 ntBASIC2.55□□□□□ -2
ZIC3O60481 RNU6-1010P-201ENST00000362757 107 ntBASIC2.55□□□□□ -2
ZIC3O60481 RNU6-1285P-201ENST00000363480 105 ntBASIC2.55□□□□□ -2
ZIC3O60481 RNU6-1141P-201ENST00000364520 107 ntBASIC2.55□□□□□ -2
ZIC3O60481 SNORA51.4-201ENST00000364993 124 ntBASIC2.55□□□□□ -2
ZIC3O60481 RNU2-23P-201ENST00000410545 195 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.55□□□□□ -2
ZIC3O60481 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.55□□□□□ -2
ZIC3O60481 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.55□□□□□ -2
ZIC3O60481 RPS29P6-201ENST00000438196 145 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC009541.1-201ENST00000438279 2662 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC011816.1-201ENST00000441346 546 ntBASIC2.55□□□□□ -2
ZIC3O60481 RPL30P12-201ENST00000474666 353 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC022447.4-201ENST00000504053 364 ntBASIC2.55□□□□□ -2
ZIC3O60481 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.55□□□□□ -2
ZIC3O60481 SMURF2P1-201ENST00000514992 481 ntBASIC2.55□□□□□ -2
ZIC3O60481 SCARNA11.3-201ENST00000517276 130 ntBASIC2.55□□□□□ -2
ZIC3O60481 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.55□□□□□ -2
ZIC3O60481 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.55□□□□□ -2
ZIC3O60481 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
ZIC3O60481 CBX3P8-201ENST00000532412 525 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC079598.5-201ENST00000547460 117 ntBASIC2.55□□□□□ -2
ZIC3O60481 ELOCP29-201ENST00000588193 334 ntBASIC2.55□□□□□ -2
ZIC3O60481 AL080274.1-201ENST00000605565 220 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.55□□□□□ -2
ZIC3O60481 AC005014.2-201ENST00000607795 599 ntBASIC2.55□□□□□ -2
ZIC3O60481 AC096772.1-201ENST00000609146 564 ntBASIC2.55□□□□□ -2
ZIC3O60481 AL159153.1-201ENST00000619688 317 ntBASIC2.55□□□□□ -2
ZIC3O60481 SNORA43.4-201ENST00000629559 138 ntBASIC2.55□□□□□ -2
ZIC3O60481 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.55□□□□□ -2
ZIC3O60481 AC002543.1-201ENST00000299783 1954 ntBASIC2.54□□□□□ -2
ZIC3O60481 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
ZIC3O60481 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.54□□□□□ -2
ZIC3O60481 MTND5P9-201ENST00000503854 1755 ntBASIC2.54□□□□□ -2
ZIC3O60481 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.54□□□□□ -2
ZIC3O60481 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.54□□□□□ -2
ZIC3O60481 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZIC3O60481 RNU6-529P-201ENST00000363383 104 ntBASIC2.54□□□□□ -2
ZIC3O60481 Y_RNA.138-201ENST00000363462 102 ntBASIC2.54□□□□□ -2
ZIC3O60481 Y_RNA.395-201ENST00000383945 109 ntBASIC2.54□□□□□ -2
ZIC3O60481 RNU6-1040P-201ENST00000383974 107 ntBASIC2.54□□□□□ -2
ZIC3O60481 Y_RNA.533-201ENST00000384596 114 ntBASIC2.54□□□□□ -2
ZIC3O60481 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.54□□□□□ -2
ZIC3O60481 MIR1289-1-201ENST00000408836 144 ntBASIC2.54□□□□□ -2
ZIC3O60481 RN7SKP61-201ENST00000410642 295 ntBASIC2.54□□□□□ -2
ZIC3O60481 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.54□□□□□ -2
ZIC3O60481 CYCSP48-201ENST00000417124 323 ntBASIC2.54□□□□□ -2
ZIC3O60481 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.54□□□□□ -2
ZIC3O60481 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.54□□□□□ -2
ZIC3O60481 MTCO2P12-201ENST00000427426 682 ntBASIC2.54□□□□□ -2
ZIC3O60481 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
ZIC3O60481 AC244505.4-201ENST00000434905 287 ntBASIC2.54□□□□□ -2
ZIC3O60481 SSXP5-201ENST00000443473 287 ntBASIC2.54□□□□□ -2
ZIC3O60481 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
ZIC3O60481 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.54□□□□□ -2
ZIC3O60481 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
ZIC3O60481 RNU6-307P-201ENST00000516743 106 ntBASIC2.54□□□□□ -2
ZIC3O60481 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
ZIC3O60481 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
ZIC3O60481 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.54□□□□□ -2
ZIC3O60481 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.54□□□□□ -2
ZIC3O60481 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
ZIC3O60481 CYP2C61P-201ENST00000604072 290 ntBASIC2.54□□□□□ -2
ZIC3O60481 HMGB1P24-202ENST00000615653 685 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms