Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC104982.1-201ENST00000478775 574 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.02□□□□□ -2.41
SSSCA1O60232 RNU6-143P-201ENST00000516942 93 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 AP003355.1-201ENST00000518956 587 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.02□□□□□ -2.41
SSSCA1O60232 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.02□□□□□ -2.41
SSSCA1O60232 AL137100.2-201ENST00000555786 315 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 AL445264.1-201ENST00000621719 171 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.02□□□□□ -2.41
SSSCA1O60232 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.02□□□□□ -2.41
SSSCA1O60232 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AL159152.1-201ENST00000635019 2587 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 MIR103A1-201ENST00000362165 78 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AC013262.1-201ENST00000426710 252 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AC073614.1-201ENST00000438690 650 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AL162395.1-201ENST00000457882 422 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.03□□□□□ -2.41
SSSCA1O60232 AC114981.1-201ENST00000503897 678 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AP001189.2-201ENST00000527320 189 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 MIR4781-201ENST00000585250 76 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AL357080.1-201ENST00000617394 239 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 AC100810.6-201ENST00000638068 285 ntBASIC-0.03□□□□□ -2.41
SSSCA1O60232 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
SSSCA1O60232 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
SSSCA1O60232 RNA5SP511-201ENST00000410487 115 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC-0.04□□□□□ -2.42
SSSCA1O60232 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.04□□□□□ -2.42
SSSCA1O60232 RPL23AP95-201ENST00000426806 265 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
SSSCA1O60232 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.04□□□□□ -2.42
SSSCA1O60232 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC092991.1-201ENST00000477176 376 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 MTCO3P28-201ENST00000513351 515 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 RNU6-922P-201ENST00000516753 99 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC011979.2-201ENST00000527568 352 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC104229.1-201ENST00000561364 255 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 MIR4666A-201ENST00000580160 79 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC100812.1-201ENST00000607622 580 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC073349.3-201ENST00000617616 186 ntBASIC-0.04□□□□□ -2.42
SSSCA1O60232 AC107982.1-201ENST00000507171 1300 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 RNU6-216P-201ENST00000363282 104 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 SNORA25.9-201ENST00000365087 128 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 SNORA36.2-201ENST00000384004 127 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 AL359634.1-202ENST00000404721 284 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 MTCO3P41-201ENST00000414801 328 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 RNU7-21P-201ENST00000459430 62 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
SSSCA1O60232 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.05□□□□□ -2.42
SSSCA1O60232 SNORA59B-202ENST00000578183 701 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 BNIP3P9-201ENST00000603714 553 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 MIR8070-201ENST00000616510 88 ntBASIC-0.05□□□□□ -2.42
SSSCA1O60232 SNORD114-23-201ENST00000363536 72 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 RNU2-70P-201ENST00000410718 179 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
SSSCA1O60232 RPF2P2-201ENST00000504693 896 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.06□□□□□ -2.42
SSSCA1O60232 CR383656.8-201ENST00000549046 145 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 AL136520.1-202ENST00000555494 763 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-0.06□□□□□ -2.42
SSSCA1O60232 MIR5695-201ENST00000579717 85 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 MIR3136-201ENST00000583498 78 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 AC243773.3-201ENST00000613270 256 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 AC116165.2-201ENST00000616705 206 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 AC007792.1-201ENST00000623023 402 ntBASIC-0.06□□□□□ -2.42
SSSCA1O60232 RNU4-67P-201ENST00000364569 141 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 SNORA16.2-201ENST00000390991 127 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 RNA5SP222-201ENST00000411039 105 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 RNU7-90P-201ENST00000459216 62 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 CYCTP-201ENST00000504253 315 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 RNA5SP220-201ENST00000516298 104 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 AC025627.3-201ENST00000582078 182 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 AC007742.2-201ENST00000618226 398 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 AL512643.1-201ENST00000635735 524 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 OR5AK4P-201ENST00000635912 903 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.07□□□□□ -2.42
SSSCA1O60232 CASC19-280ENST00000642102 1351 ntBASIC-0.07□□□□□ -2.42
SSSCA1O60232 RNU6-37P-201ENST00000362692 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-11P-201ENST00000364234 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 SNORD32B-201ENST00000364460 84 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-1-201ENST00000383898 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-42P-201ENST00000384165 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-36P-201ENST00000384172 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-4P-201ENST00000384205 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-5P-201ENST00000384238 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-3P-201ENST00000384314 107 ntBASIC-0.08□□□□□ -2.42
SSSCA1O60232 RNU6-342P-201ENST00000384521 104 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms