Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL590383.1-201ENST00000428602 75 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 U8.22-201ENST00000459141 133 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 SNORA64.4-201ENST00000516632 81 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 SCARNA24.2-201ENST00000516968 130 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 MIR3200-201ENST00000580767 85 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 Y_RNA.772-201ENST00000606692 102 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 AC090132.2-201ENST00000615881 347 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 U2.22-201ENST00000636441 106 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 LINC02555-201ENST00000563933 1951 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRGAP3O43295 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SRGAP3O43295 ZNF826P-207ENST00000622273 1910 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SRGAP3O43295 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRGAP3O43295 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SRGAP3O43295 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SRGAP3O43295 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRGAP3O43295 RNU6-78P-201ENST00000362897 107 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 SNORD81.1-201ENST00000363064 77 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 SNORD56.3-201ENST00000363507 71 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 RNU6-1181P-201ENST00000384191 106 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SRGAP3O43295 SNORD67-201ENST00000390833 111 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 BTF3L4P2-201ENST00000392798 346 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 MRPL35P1-201ENST00000404272 572 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 TMEM167AP1-201ENST00000423409 219 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 ARF4P2-201ENST00000430209 526 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.87□□□□□ -1.79
SRGAP3O43295 snoU13.4-201ENST00000458916 104 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 RN7SL330P-201ENST00000469709 307 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 AL049830.2-201ENST00000480072 201 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.87□□□□□ -1.79
SRGAP3O43295 ANXA2P1-201ENST00000505539 926 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 RNU4-71P-201ENST00000516258 113 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 RN7SKP289-201ENST00000517244 295 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 AC093331.1-201ENST00000521474 169 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 AC010186.2-204ENST00000537668 439 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 AP002770.2-201ENST00000543613 532 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.87□□□□□ -1.79
SRGAP3O43295 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.87□□□□□ -1.79
SRGAP3O43295 FTX_2.1-201ENST00000618816 94 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 U6.99-201ENST00000637524 83 ntBASIC3.87□□□□□ -1.79
SRGAP3O43295 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SRGAP3O43295 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRGAP3O43295 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRGAP3O43295 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRGAP3O43295 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SRGAP3O43295 Y_RNA.269-201ENST00000364685 89 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 RNU6-805P-201ENST00000365643 106 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 SNORA54-201ENST00000384281 123 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 SNORD15B-201ENST00000384714 146 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 RNA5SP293-201ENST00000410527 113 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.86□□□□□ -1.79
SRGAP3O43295 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.86□□□□□ -1.79
SRGAP3O43295 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.86□□□□□ -1.79
SRGAP3O43295 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.86□□□□□ -1.79
SRGAP3O43295 snoU13.24-201ENST00000458998 104 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 RPS27P29-201ENST00000463110 252 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 RNA5SP217-201ENST00000515959 91 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 SNORA31.18-201ENST00000517043 134 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 AC022868.1-201ENST00000517767 391 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.86□□□□□ -1.79
SRGAP3O43295 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.86□□□□□ -1.79
SRGAP3O43295 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.86□□□□□ -1.79
SRGAP3O43295 BX284668.6-201ENST00000606899 438 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 AC004792.1-201ENST00000614523 137 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 AC011476.5-201ENST00000615594 130 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 U4.7-201ENST00000638126 106 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 MIR622-201ENST00000638396 96 ntBASIC3.86□□□□□ -1.79
SRGAP3O43295 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SRGAP3O43295 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SRGAP3O43295 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
SRGAP3O43295 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC093908.1-201ENST00000623125 8092 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 RNU6-222P-201ENST00000362438 107 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 U3.15-201ENST00000365398 212 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 Y_RNA.541-201ENST00000384640 113 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 AL079342.1-201ENST00000401460 267 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 RPS29P13-201ENST00000402041 169 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC098614.2-201ENST00000426040 255 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 Z82188.1-201ENST00000436709 154 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 RPS12P18-201ENST00000442381 270 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.85□□□□□ -1.79
SRGAP3O43295 SNORD108-201ENST00000459332 71 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 AC008885.1-201ENST00000514930 301 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 MIR2355-201ENST00000517199 87 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC023824.2-201ENST00000566185 400 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 AC060766.3-201ENST00000591442 263 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SRGAP3O43295 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SRGAP3O43295 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC009541.1-201ENST00000438279 2662 ntBASIC3.85□□□□□ -1.79
SRGAP3O43295 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.85□□□□□ -1.79
SRGAP3O43295 AC233981.2-201ENST00000611524 1614 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms