Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH5O43196 AC007536.1-201ENST00000533382 349 ntBASIC7.38□□□□□ -1.23
MSH5O43196 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH5O43196 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC7.38□□□□□ -1.23
MSH5O43196 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC7.38□□□□□ -1.23
MSH5O43196 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC7.38□□□□□ -1.23
MSH5O43196 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MSH5O43196 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.38□□□□□ -1.23
MSH5O43196 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.38□□□□□ -1.23
MSH5O43196 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.38□□□□□ -1.23
MSH5O43196 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC7.38□□□□□ -1.23
MSH5O43196 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MSH5O43196 SMG1P4-204ENST00000523028 4131 ntBASIC7.37□□□□□ -1.23
MSH5O43196 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.37□□□□□ -1.23
MSH5O43196 AC073073.1-201ENST00000493920 463 ntBASIC7.37□□□□□ -1.23
MSH5O43196 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 SCARNA3-201ENST00000517097 143 ntBASIC7.37□□□□□ -1.23
MSH5O43196 AC006116.3-201ENST00000592968 361 ntBASIC7.37□□□□□ -1.23
MSH5O43196 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC7.37□□□□□ -1.23
MSH5O43196 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.37□□□□□ -1.23
MSH5O43196 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.37□□□□□ -1.23
MSH5O43196 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
MSH5O43196 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
MSH5O43196 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
MSH5O43196 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
MSH5O43196 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
MSH5O43196 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.36□□□□□ -1.23
MSH5O43196 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC7.36□□□□□ -1.23
MSH5O43196 AL138820.1-201ENST00000617901 5305 ntBASIC7.36□□□□□ -1.23
MSH5O43196 U3.32-201ENST00000408116 212 ntBASIC7.36□□□□□ -1.23
MSH5O43196 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC7.36□□□□□ -1.23
MSH5O43196 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.36□□□□□ -1.23
MSH5O43196 PSMD10P3-201ENST00000437000 448 ntBASIC7.36□□□□□ -1.23
MSH5O43196 RNU7-45P-201ENST00000459460 63 ntBASIC7.36□□□□□ -1.23
MSH5O43196 AC006463.2-201ENST00000473326 348 ntBASIC7.36□□□□□ -1.23
MSH5O43196 RNU6-1291P-201ENST00000516591 104 ntBASIC7.36□□□□□ -1.23
MSH5O43196 AL161713.1-201ENST00000555538 145 ntBASIC7.36□□□□□ -1.23
MSH5O43196 ZNF861P-201ENST00000588126 639 ntBASIC7.36□□□□□ -1.23
MSH5O43196 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
MSH5O43196 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
MSH5O43196 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
MSH5O43196 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
MSH5O43196 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
MSH5O43196 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MSH5O43196 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
MSH5O43196 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MSH5O43196 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
MSH5O43196 U3.3-201ENST00000362986 216 ntBASIC7.35□□□□□ -1.23
MSH5O43196 Y_RNA.264-201ENST00000364665 102 ntBASIC7.35□□□□□ -1.23
MSH5O43196 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.35□□□□□ -1.23
MSH5O43196 PHBP16-201ENST00000446318 950 ntBASIC7.35□□□□□ -1.23
MSH5O43196 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.35□□□□□ -1.23
MSH5O43196 AC013412.1-201ENST00000610687 192 ntBASIC7.35□□□□□ -1.23
MSH5O43196 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC7.35□□□□□ -1.23
MSH5O43196 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.35□□□□□ -1.23
MSH5O43196 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.35□□□□□ -1.23
MSH5O43196 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MSH5O43196 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MSH5O43196 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
MSH5O43196 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
MSH5O43196 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
MSH5O43196 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC7.34□□□□□ -1.23
MSH5O43196 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH5O43196 AL591135.1-201ENST00000401578 5914 ntBASIC7.34□□□□□ -1.23
MSH5O43196 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
MSH5O43196 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
MSH5O43196 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MSH5O43196 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC7.34□□□□□ -1.23
MSH5O43196 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH5O43196 RNA5SP131-201ENST00000365452 119 ntBASIC7.34□□□□□ -1.23
MSH5O43196 RNU6ATAC41P-201ENST00000408600 126 ntBASIC7.34□□□□□ -1.23
MSH5O43196 FTH1P12-201ENST00000432137 551 ntBASIC7.34□□□□□ -1.23
MSH5O43196 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC7.34□□□□□ -1.23
MSH5O43196 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH5O43196 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
MSH5O43196 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH5O43196 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
MSH5O43196 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
MSH5O43196 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC7.34□□□□□ -1.24
MSH5O43196 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
MSH5O43196 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MSH5O43196 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC7.33□□□□□ -1.24
MSH5O43196 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MSH5O43196 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH5O43196 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
MSH5O43196 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.33□□□□□ -1.24
MSH5O43196 AC016397.1-201ENST00000412463 242 ntBASIC7.33□□□□□ -1.24
MSH5O43196 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC7.33□□□□□ -1.24
MSH5O43196 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC7.33□□□□□ -1.24
MSH5O43196 AC009220.1-201ENST00000451614 275 ntBASIC7.33□□□□□ -1.24
MSH5O43196 SDC4P-201ENST00000453285 601 ntBASIC7.33□□□□□ -1.24
MSH5O43196 AZGP1P2-201ENST00000454506 345 ntBASIC7.33□□□□□ -1.24
MSH5O43196 ACA64.4-201ENST00000459070 127 ntBASIC7.33□□□□□ -1.24
MSH5O43196 RNU6-998P-201ENST00000515894 101 ntBASIC7.33□□□□□ -1.24
MSH5O43196 AL133481.2-203ENST00000607558 139 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms