Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-37P-201ENST00000362692 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-11P-201ENST00000364234 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-25P-201ENST00000383873 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-1-201ENST00000383898 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-48P-201ENST00000384161 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-36P-201ENST00000384172 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-4P-201ENST00000384205 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-5P-201ENST00000384238 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-3P-201ENST00000384314 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-16P-201ENST00000384385 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-15P-201ENST00000384534 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-2-201ENST00000384627 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-29P-201ENST00000384637 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 Y_RNA.560-201ENST00000384689 102 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-9-201ENST00000384776 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-33P-201ENST00000384793 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 SNORA17.3-201ENST00000391159 129 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 GPR143P-201ENST00000434155 205 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 AC079448.1-201ENST00000449377 373 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 MTCYBP1-201ENST00000454315 1119 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 AC087441.2-201ENST00000529141 262 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 VN1R80P-201ENST00000597126 338 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.48□□□□□ -2.17
CLOCKO15516 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.48□□□□□ -2.17
CLOCKO15516 AL034555.1-201ENST00000604816 211 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 AC016925.2-201ENST00000605108 242 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 RNU6-6P-201ENST00000606623 107 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.48□□□□□ -2.17
CLOCKO15516 AC104073.3-201ENST00000610942 955 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLOCKO15516 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLOCKO15516 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 SNORD114-6-201ENST00000364393 72 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 SNORA72.3-201ENST00000365074 132 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 RNU6-715P-201ENST00000365204 103 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 RNU6-142P-201ENST00000384019 107 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AL031577.2-201ENST00000404133 280 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.47□□□□□ -2.17
CLOCKO15516 AC013410.2-201ENST00000422627 201 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 MTND2P4-201ENST00000445034 1004 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 HMGN2P18-201ENST00000450680 270 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC112492.4-201ENST00000456549 352 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC145146.1-201ENST00000496370 254 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.47□□□□□ -2.17
CLOCKO15516 FAM206BP-201ENST00000510179 541 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 MIR449C-201ENST00000516047 92 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 RNU6-1178P-201ENST00000516674 107 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 RNA5SP490-201ENST00000517141 136 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC109479.2-201ENST00000517842 174 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.47□□□□□ -2.17
CLOCKO15516 AP001372.4-201ENST00000524889 472 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.47□□□□□ -2.17
CLOCKO15516 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.47□□□□□ -2.17
CLOCKO15516 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 MIR4775-201ENST00000581168 75 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.47□□□□□ -2.17
CLOCKO15516 MIR3136-201ENST00000583498 78 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC008752.3-201ENST00000588113 712 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AL590240.4-201ENST00000616908 390 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AL603839.4-201ENST00000624658 1005 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 SNORD98-201ENST00000636377 67 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 AC006026.1-201ENST00000444025 1803 ntBASIC1.47□□□□□ -2.17
CLOCKO15516 MIR424-201ENST00000362227 98 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 Y_RNA.332-201ENST00000365271 113 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 RNU6-74P-201ENST00000384235 107 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 MIR454-201ENST00000390180 115 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 SNORA12-201ENST00000391162 147 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 RNU6-293P-201ENST00000411259 106 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.46□□□□□ -2.18
CLOCKO15516 NCOR1P3-201ENST00000420479 303 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AL669831.1-202ENST00000428504 417 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AC009961.2-201ENST00000435771 251 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 GTF2IP13-201ENST00000438487 386 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.46□□□□□ -2.18
CLOCKO15516 GAPDHP17-201ENST00000449858 1001 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.46□□□□□ -2.18
CLOCKO15516 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.46□□□□□ -2.18
CLOCKO15516 AC023050.3-201ENST00000541142 333 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AC005786.1-201ENST00000588553 154 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 BNIP3P16-201ENST00000589779 534 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 Z99289.3-201ENST00000605586 594 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AC008250.2-201ENST00000615261 205 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AC079248.2-201ENST00000623779 326 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.46□□□□□ -2.18
CLOCKO15516 AP000560.1-201ENST00000624150 1937 ntBASIC1.46□□□□□ -2.18
CLOCKO15516 LINC02555-201ENST00000563933 1951 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms