Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 RNU6-855P-201ENST00000410395 104 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 RNA5SP311-201ENST00000411290 116 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.21□□□□□ -1.58
SEMA3EO15041 AL135790.2-201ENST00000437701 267 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 RNA5SP315-201ENST00000516340 116 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 RNA5SP312-201ENST00000517068 116 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.21□□□□□ -1.58
SEMA3EO15041 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.21□□□□□ -1.58
SEMA3EO15041 AC090616.3-201ENST00000582184 217 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 AL391903.3-201ENST00000612158 163 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 AL391261.4-201ENST00000616012 481 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 ZYXP1-201ENST00000617638 118 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 AC091953.5-201ENST00000622919 233 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 RNA5SP196-201ENST00000625967 102 ntBASIC5.21□□□□□ -1.58
SEMA3EO15041 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEMA3EO15041 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.21□□□□□ -1.58
SEMA3EO15041 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SEMA3EO15041 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SEMA3EO15041 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SEMA3EO15041 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEMA3EO15041 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEMA3EO15041 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SEMA3EO15041 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.2□□□□□ -1.58
SEMA3EO15041 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SEMA3EO15041 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.2□□□□□ -1.58
SEMA3EO15041 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEMA3EO15041 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SEMA3EO15041 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.2□□□□□ -1.58
SEMA3EO15041 snoU2_19.4-201ENST00000364329 80 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 RNA5SP205-201ENST00000364653 136 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 RNU1-13P-201ENST00000384499 162 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 SNORA57.1-201ENST00000391227 145 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 RNU2-49P-201ENST00000410666 184 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 RNA5SP504-201ENST00000410676 117 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 AL139281.1-201ENST00000422120 335 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 AC146507.2-201ENST00000460608 476 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 RPS29P2-201ENST00000479278 136 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.2□□□□□ -1.58
SEMA3EO15041 AC109810.1-201ENST00000534066 224 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.2□□□□□ -1.58
SEMA3EO15041 AL391813.1-201ENST00000603098 260 ntBASIC5.2□□□□□ -1.58
SEMA3EO15041 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEMA3EO15041 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SEMA3EO15041 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.2□□□□□ -1.58
SEMA3EO15041 SCN1A-220ENST00000641603 12506 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEMA3EO15041 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEMA3EO15041 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SEMA3EO15041 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEMA3EO15041 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEMA3EO15041 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEMA3EO15041 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SEMA3EO15041 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
SEMA3EO15041 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEMA3EO15041 RNU1-94P-201ENST00000362627 173 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RNU6-199P-201ENST00000362954 107 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RNU4-11P-201ENST00000365287 132 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 Y_RNA.361-201ENST00000365515 120 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 MIR539-201ENST00000365690 78 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 AP002088.1-201ENST00000382740 395 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RNU6-144P-201ENST00000383951 107 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RNU1-57P-201ENST00000384491 166 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SEMA3EO15041 AC010099.1-201ENST00000455434 375 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 SNRPGP5-201ENST00000456003 220 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RNA5SP246-201ENST00000458909 119 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RNA5SP154-201ENST00000516193 111 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 AC006064.5-201ENST00000541782 248 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 RN7SL600P-201ENST00000581811 299 ntBASIC5.19□□□□□ -1.58
SEMA3EO15041 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.19□□□□□ -1.58
SEMA3EO15041 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEMA3EO15041 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.19□□□□□ -1.58
SEMA3EO15041 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SEMA3EO15041 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SEMA3EO15041 AF127577.6-201ENST00000623352 2191 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SEMA3EO15041 RNU6-1205P-201ENST00000363625 106 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 Y_RNA.273-201ENST00000364703 102 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SEMA3EO15041 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SEMA3EO15041 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.18□□□□□ -1.58
SEMA3EO15041 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SEMA3EO15041 DEFB131C-201ENST00000528817 165 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 RNU1-30P-201ENST00000606575 163 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 U6.115-201ENST00000636045 103 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEMA3EO15041 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEMA3EO15041 AL672167.1-203ENST00000641299 2975 ntBASIC5.18□□□□□ -1.58
SEMA3EO15041 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEMA3EO15041 AC011266.1-201ENST00000624119 3569 ntBASIC5.17□□□□□ -1.58
SEMA3EO15041 AC092435.4-201ENST00000623012 4159 ntBASIC5.17□□□□□ -1.58
SEMA3EO15041 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SEMA3EO15041 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.17□□□□□ -1.58
SEMA3EO15041 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEMA3EO15041 Y_RNA.24-201ENST00000362508 103 ntBASIC5.17□□□□□ -1.58
SEMA3EO15041 RNA5SP22-201ENST00000365393 109 ntBASIC5.17□□□□□ -1.58
SEMA3EO15041 U1.1-201ENST00000384101 164 ntBASIC5.17□□□□□ -1.58
SEMA3EO15041 RNA5SP146-201ENST00000410743 123 ntBASIC5.17□□□□□ -1.58
SEMA3EO15041 MIR1911-201ENST00000410783 80 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms