Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC026464.5-201ENST00000562497 722 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 AGGF1P4-201ENST00000568249 801 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 AC010928.2-201ENST00000588017 287 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
SMKR1H3BMG3 AC012507.3-201ENST00000603556 477 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 Z94722.1-201ENST00000604328 474 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 MIR8074-201ENST00000615081 81 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 AC120349.3-201ENST00000624377 529 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 AC022513.1-201ENST00000624512 117 ntBASIC1.33□□□□□ -2.2
SMKR1H3BMG3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 RNU6-266P-201ENST00000364225 107 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 SNORD48-201ENST00000364953 64 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 RNU6-827P-201ENST00000365553 106 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 RNU6-438P-201ENST00000365561 103 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 RNU6-338P-201ENST00000383888 105 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AL079342.1-201ENST00000401460 267 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 MTCO3P46-201ENST00000425787 232 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 SNRPEP8-201ENST00000442866 260 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC244505.5-201ENST00000443639 207 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC010486.1-201ENST00000511793 424 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC069113.1-201ENST00000517763 267 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC078795.3-201ENST00000602913 472 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 MIR92B-201ENST00000607575 96 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC087683.2-201ENST00000611384 326 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC072046.2-201ENST00000618366 268 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC245060.5-201ENST00000610778 3293 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 MTND4P14-201ENST00000435799 1354 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AL390237.1-201ENST00000404226 1415 ntBASIC1.32□□□□□ -2.2
SMKR1H3BMG3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.32□□□□□ -2.2
SMKR1H3BMG3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 MIR340-201ENST00000362125 95 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 RNU6-439P-201ENST00000384188 106 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 RNU4-53P-201ENST00000410828 140 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 MTCO2P34-201ENST00000421994 607 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 HMGB1P18-201ENST00000438801 619 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC132479.1-201ENST00000449160 144 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 ATP5EP1-201ENST00000510257 156 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC068790.2-201ENST00000602601 557 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AC025449.1-201ENST00000603896 529 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 AP001596.2-201ENST00000608410 312 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 MTND5P9-201ENST00000503854 1755 ntBASIC1.31□□□□□ -2.2
SMKR1H3BMG3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 MIR208A-201ENST00000362287 71 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU6-552P-201ENST00000362869 119 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 SNORA32.2-201ENST00000384049 122 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU2-9P-201ENST00000410194 145 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU2-2P-201ENST00000410396 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU2-41P-201ENST00000410991 178 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC139712.2-201ENST00000424302 339 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC002486.1-201ENST00000435098 391 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 MTND1P27-201ENST00000451117 902 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 C1DP4-201ENST00000455429 424 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 SNRPFP3-201ENST00000457792 225 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RPL31P3-201ENST00000458430 332 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU7-167P-201ENST00000459160 62 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC007547.1-201ENST00000462177 490 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC087477.1-201ENST00000465747 340 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RPL9P6-201ENST00000492764 598 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC097473.1-201ENST00000508142 408 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC025465.3-201ENST00000510570 311 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RN7SKP219-201ENST00000516825 296 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AL137161.1-201ENST00000532231 390 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms