Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU6-723P-201ENST00000383973 107 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-1065P-201ENST00000384513 106 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 RPL23AP32-201ENST00000395315 459 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC069282.1-201ENST00000411911 526 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 MTCO1P21-201ENST00000416634 589 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AL590556.1-201ENST00000423231 483 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 HMGN2P9-201ENST00000476875 229 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 UBL5P1-201ENST00000507979 193 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC104806.1-201ENST00000508720 308 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC079140.3-201ENST00000511111 550 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC019176.1-201ENST00000518519 225 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC010376.1-201ENST00000522101 334 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC115990.1-201ENST00000526957 301 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC011604.1-201ENST00000545978 196 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 MZT1P2-201ENST00000604387 248 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC091965.4-201ENST00000607691 587 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-1192P-201ENST00000612197 107 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-489P-201ENST00000618289 107 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 AC131159.1-201ENST00000621854 213 ntBASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV3A0A0B4J244 SNORD56.1-201ENST00000362913 68 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 Y_RNA.110-201ENST00000363220 99 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-1019P-201ENST00000364424 107 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RNU1-36P-201ENST00000365130 165 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RPS3AP36-201ENST00000398190 775 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 CYCSP33-201ENST00000414485 327 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RPL23AP30-201ENST00000432419 501 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 MTCYBP39-201ENST00000437562 491 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 PRPS1P1-201ENST00000445305 876 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 PGBD4P5-201ENST00000445958 426 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RPS4XP11-201ENST00000446897 772 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AL122001.1-201ENST00000457027 370 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RNU2-10P-201ENST00000516375 211 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-1003P-201ENST00000517099 105 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-201P-201ENST00000517100 61 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 SUMO2P18-201ENST00000518873 252 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 HSPE1P4-201ENST00000550617 308 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 MIR151B-201ENST00000584249 96 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 MIR548AC-201ENST00000585049 88 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AL606834.3-201ENST00000602615 496 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AC069114.2-201ENST00000604699 304 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AC108747.1-201ENST00000609508 535 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AC084824.5-201ENST00000612009 413 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AL359547.2-201ENST00000615810 418 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 U6.42-201ENST00000618440 107 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 MIR8065-201ENST00000620577 100 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 OR4G3P-201ENST00000633500 913 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 AC099654.5-201ENST00000636479 350 ntBASIC0.63□□□□□ -2.31
TRAV3A0A0B4J244 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 Y_RNA.46-201ENST00000362695 102 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 RNU1-93P-201ENST00000364704 169 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 SNORA25-201ENST00000384384 134 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 RNU11-5P-201ENST00000391216 129 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 RN7SKP61-201ENST00000410642 295 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 POLR2J4-204ENST00000418424 324 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 RNA5SP269-201ENST00000459032 137 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AC023050.2-201ENST00000544968 387 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 MTND4LP25-201ENST00000570218 163 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 MIR3664-201ENST00000579074 99 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AC068620.3-201ENST00000602749 560 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AL592221.1-201ENST00000605266 382 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AC092106.3-201ENST00000611308 722 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 RMST_4.1-201ENST00000616886 107 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 MIR6767-201ENST00000637302 66 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 AC103706.2-201ENST00000638080 240 ntBASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV3A0A0B4J244 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 MIR373-201ENST00000362273 69 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 Y_RNA.118-201ENST00000363300 101 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 RNY1P14-201ENST00000384426 108 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 MIR146A-201ENST00000385201 99 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms