Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.64-201ENST00000362845 102 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 RNU4-56P-201ENST00000364700 142 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 SNORD78.2-201ENST00000391076 69 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AL133475.1-201ENST00000404414 305 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 MIR1302-6-201ENST00000408466 90 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-1140P-201ENST00000410517 106 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 RPS15AP7-201ENST00000439294 405 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AP000705.1-201ENST00000454567 350 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 LINC01399-202ENST00000458450 244 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AC025465.3-201ENST00000510570 311 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 TGIF1P1-201ENST00000558095 802 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-529P-201ENST00000363383 104 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.288-201ENST00000364854 92 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 RNA5SP479-201ENST00000364858 117 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.396-201ENST00000383949 103 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-281P-201ENST00000384212 103 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-472P-201ENST00000384299 107 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 MIR10B-201ENST00000385011 110 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 MIR767-201ENST00000390228 109 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 U3.19-201ENST00000390893 196 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 CBX3P6-201ENST00000430257 527 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AC091286.1-201ENST00000431233 461 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AL136097.1-201ENST00000456945 913 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 SNORA31.16-201ENST00000516773 139 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AC093023.1-201ENST00000547375 507 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 CYP4A27P-201ENST00000567218 190 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 AC240442.1-201ENST00000616055 283 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 SNORD98-201ENST00000636377 67 ntBASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA9Q9Y5H5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-879P-201ENST00000364328 108 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-806P-201ENST00000365147 105 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.461-201ENST00000384263 103 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-318P-201ENST00000384283 103 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 SNORA57.1-201ENST00000391227 145 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 RNA5SP354-201ENST00000391247 136 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 MRPL35P1-201ENST00000404272 572 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 MIR1193-201ENST00000408109 78 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 HMGB1P35-201ENST00000503360 598 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AC026402.1-201ENST00000513642 170 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AP003733.2-201ENST00000529409 171 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AC069200.1-201ENST00000609511 323 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AC005520.5-201ENST00000613926 164 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AC005296.1-201ENST00000616145 209 ntBASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA9Q9Y5H5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.46□□□□□ -1.85
PCDHA9Q9Y5H5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHA9Q9Y5H5 AC068647.1-201ENST00000489539 2265 ntBASIC3.46□□□□□ -1.85
PCDHA9Q9Y5H5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.26-201ENST00000362539 101 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-212P-201ENST00000362642 104 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-280P-201ENST00000364145 104 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.376-201ENST00000365638 108 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 U3.26-201ENST00000391236 204 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AIMP1P2-201ENST00000425294 312 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 WARS2P1-201ENST00000429678 537 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 snoU13.6-201ENST00000458785 104 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms