Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC079448.1-201ENST00000449377 373 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 UBL5P3-201ENST00000475112 231 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC009646.1-201ENST00000510455 318 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC104136.1-201ENST00000512969 394 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 MIR4775-201ENST00000581168 75 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 MIR4422-201ENST00000581938 83 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC009318.2-201ENST00000610917 651 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC104073.3-201ENST00000610942 955 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AC063943.3-201ENST00000615562 356 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 MIR1248-201ENST00000629190 106 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 U6.114-201ENST00000636407 96 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LRRC42Q9Y546 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AC091812.1-201ENST00000432235 1948 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 RNU6-1287P-201ENST00000362914 107 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 Y_RNA.324-201ENST00000365165 102 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 RNU6-1060P-201ENST00000384664 107 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 MIR544A-201ENST00000384855 91 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 MIR1-2-201ENST00000384961 85 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 MT-TH-201ENST00000387441 69 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 U8.13-201ENST00000390842 128 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 BTF3L4P2-201ENST00000392798 346 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 RNU6-248P-201ENST00000410720 107 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL591043.1-201ENST00000432461 424 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL121601.2-201ENST00000438019 707 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL445567.1-201ENST00000439121 144 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 KATNBL1P3-201ENST00000443475 909 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL033528.1-201ENST00000453780 140 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 MTND2P33-201ENST00000506452 1031 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 RNU5F-2P-201ENST00000516066 82 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 RNU6-1178P-201ENST00000516674 107 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 AC064872.1-201ENST00000604823 1072 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 MIR98-201ENST00000606724 119 ntBASIC1.35□□□□□ -2.19
LRRC42Q9Y546 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.35□□□□□ -2.19
LRRC42Q9Y546 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC006026.1-201ENST00000444025 1803 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 FGF7P2-201ENST00000332473 296 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU6-527P-201ENST00000363425 104 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU6-1285P-201ENST00000363480 105 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU6-1097P-201ENST00000363586 107 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU6-1029P-201ENST00000384109 107 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU6-1222P-201ENST00000384615 107 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU11-3P-201ENST00000391111 133 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 CBX3P6-201ENST00000430257 527 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AL596276.1-201ENST00000434465 418 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RPL32P28-201ENST00000443577 397 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 HMGN2P23-201ENST00000456759 269 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU7-182P-201ENST00000459009 62 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 SNORD42A-201ENST00000459584 64 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 MTCO3P28-201ENST00000513351 515 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNU6-991P-201ENST00000516168 107 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 SNORA18.6-201ENST00000516792 115 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 RNA5SP503-201ENST00000517047 117 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AP005660.1-201ENST00000522972 293 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AL356057.1-201ENST00000533798 831 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC012414.6-201ENST00000568241 401 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC42Q9Y546 ZNF680P1-201ENST00000436625 1469 ntBASIC1.34□□□□□ -2.19
LRRC42Q9Y546 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 MIR424-201ENST00000362227 98 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-37P-201ENST00000362692 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 Y_RNA.67-201ENST00000362870 100 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 Y_RNA.99-201ENST00000363138 105 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-11P-201ENST00000364234 107 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-282P-201ENST00000365357 103 ntBASIC1.33□□□□□ -2.2
LRRC42Q9Y546 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC42Q9Y546 RNU6-25P-201ENST00000383873 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms