Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU6-548P-201ENST00000517083 115 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC008752.3-201ENST00000588113 712 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 BNIP3P16-201ENST00000589779 534 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 MTCO2P2-201ENST00000591258 225 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AL356157.2-201ENST00000605122 111 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC105129.3-201ENST00000605455 485 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AP000240.1-201ENST00000609910 452 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC022513.1-201ENST00000624512 117 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD98-201ENST00000636377 67 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 Y_RNA.22-201ENST00000362492 102 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 RNU4-13P-201ENST00000364019 141 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-296P-201ENST00000384608 107 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MIR520A-201ENST00000384862 85 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MTCYBP2-201ENST00000407745 171 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AL008987.1-201ENST00000415528 237 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC098592.1-201ENST00000419352 333 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC007283.2-201ENST00000424739 197 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MTCO2P23-201ENST00000425216 680 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 SDAD1P3-201ENST00000427380 333 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AL669831.1-202ENST00000428504 417 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 C8orf59P1-201ENST00000429930 303 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC097473.1-201ENST00000508142 408 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MTND3P25-201ENST00000509243 135 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-311P-201ENST00000516224 102 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 RAB11AP2-201ENST00000545905 639 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC087883.1-201ENST00000551882 391 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MIR5094-201ENST00000578766 85 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 VN1R107P-201ENST00000601784 209 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 TUSC7.1-201ENST00000610969 165 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AL359740.1-201ENST00000624340 592 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC120349.3-201ENST00000624377 529 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 AC010608.3-201ENST00000625048 527 ntBASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.27□□□□□ -2.21
RHBDD3Q9Y3P4 MTND5P17-201ENST00000418405 1603 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-60P-201ENST00000364792 103 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 MTCO3P41-201ENST00000414801 328 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 RPL21P111-201ENST00000418453 477 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 CST2P1-201ENST00000425770 87 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AL512286.1-201ENST00000439244 400 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC004854.1-201ENST00000440356 349 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 RPS27AP8-201ENST00000452665 445 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC116562.3-201ENST00000506136 177 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AF131216.2-201ENST00000512316 564 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-377P-201ENST00000515965 102 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 Y_RNA.672-201ENST00000516289 104 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 RNA5SP481-201ENST00000516814 122 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC068587.5-201ENST00000528506 175 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC015720.1-201ENST00000565251 277 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC005668.1-201ENST00000571142 476 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 AC073539.2-201ENST00000597113 165 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 RPL17P51-201ENST00000605218 238 ntBASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RHBDD3Q9Y3P4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 ICE2P2-201ENST00000483823 2787 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-500P-201ENST00000362349 107 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 RNU1-62P-201ENST00000362599 164 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-438P-201ENST00000365561 103 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 CYCSP33-201ENST00000414485 327 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC078809.1-201ENST00000427601 140 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 MTND1P30-201ENST00000441241 901 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 ART2BP-201ENST00000453501 499 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC022878.1-201ENST00000530684 149 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AL590229.1-201ENST00000603497 542 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AL645939.4-201ENST00000604495 135 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 AC069114.2-201ENST00000604699 304 ntBASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RHBDD3Q9Y3P4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms