Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC093788.1-201ENST00000609356 927 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-78P-201ENST00000362897 107 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 SNORA69-201ENST00000383895 132 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 RNU1-57P-201ENST00000384491 166 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-1072P-201ENST00000384703 107 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-443P-201ENST00000384780 107 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 CALM2P3-201ENST00000400429 449 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AP000275.1-201ENST00000411943 390 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 MTND3P21-201ENST00000433774 331 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 CYP2C59P-201ENST00000457790 269 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-506P-201ENST00000516553 94 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AP003400.5-201ENST00000624827 617 ntBASIC3.96□□□□□ -1.78
SHROOM4Q9ULL8 AC131280.1-202ENST00000624067 4211 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 RNU2-63P-201ENST00000410792 194 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AP001025.1-201ENST00000486139 332 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AIG1P1-201ENST00000503376 148 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 VN1R80P-201ENST00000597126 338 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AC004492.1-201ENST00000607036 742 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 AC099654.12-201ENST00000639868 649 ntBASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.95□□□□□ -1.78
SHROOM4Q9ULL8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 RNU4-66P-201ENST00000365199 138 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 EIF4EP4-201ENST00000424916 578 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 VN1R108P-201ENST00000431580 830 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AL121601.2-201ENST00000438019 707 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 MTCO3P38-201ENST00000468910 766 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AC090096.1-201ENST00000489168 390 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 Y_RNA.693-201ENST00000516641 110 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 SNORA25.17-201ENST00000517184 124 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AP000889.2-201ENST00000532684 490 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AC090897.2-201ENST00000581715 130 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AC064807.4-201ENST00000607201 407 ntBASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.94□□□□□ -1.78
SHROOM4Q9ULL8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 MIR6073-201ENST00000352083 89 ntBASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 VTRNA1-1-201ENST00000363120 99 ntBASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-82P-201ENST00000363970 107 ntBASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-1303P-201ENST00000364841 107 ntBASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 U8.10-201ENST00000384260 133 ntBASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 AC140059.1-201ENST00000489238 361 ntBASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.93□□□□□ -1.78
SHROOM4Q9ULL8 SNORD56-201ENST00000413522 71 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 CR769767.1-201ENST00000436337 346 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 NDUFA5P4-201ENST00000436704 385 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AL161788.1-201ENST00000441805 169 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AF213884.2-201ENST00000510417 903 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AL133241.1-201ENST00000556832 487 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC025165.5-201ENST00000602802 578 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC073410.2-201ENST00000603240 332 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AL355297.2-201ENST00000604792 129 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 YWHAEP7-203ENST00000622054 312 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 SNORA25.9-201ENST00000365087 128 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-1106P-201ENST00000390845 107 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AL590002.1-201ENST00000406554 418 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 RNU2-23P-201ENST00000410545 195 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 ARL5AP1-201ENST00000418991 388 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 RPL39P40-201ENST00000445481 146 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 NDUFA5P6-201ENST00000542110 379 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 MIR4424-201ENST00000585257 86 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC060766.3-201ENST00000591442 263 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC002044.1-201ENST00000606707 158 ntBASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.92□□□□□ -1.78
SHROOM4Q9ULL8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 RNU6-529P-201ENST00000363383 104 ntBASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 TPTE2P5-203ENST00000458118 728 ntBASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 RPL30P11-203ENST00000598995 310 ntBASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 AL162413.1-201ENST00000603198 110 ntBASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 HMGB1P24-202ENST00000615653 685 ntBASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 AC008121.3-201ENST00000618726 433 ntBASIC3.91□□□□□ -1.78
SHROOM4Q9ULL8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHROOM4Q9ULL8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms