Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 RPL7P54-201ENST00000438336 674 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 FDX1P2-201ENST00000450769 375 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 RNU7-180P-201ENST00000459240 63 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 UBL5P3-201ENST00000475112 231 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC018868.1-201ENST00000491307 315 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 SNORA4.4-201ENST00000515921 135 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC069113.1-201ENST00000517763 267 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 MTND4P7-201ENST00000523876 130 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AP003034.1-201ENST00000534621 422 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 RPS3AP23-202ENST00000574601 686 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC091135.1-201ENST00000585943 307 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC116312.1-201ENST00000606841 314 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC093783.1-201ENST00000612976 329 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 AC068792.1-201ENST00000621354 417 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 MIR203B-201ENST00000636080 86 ntBASIC2.02□□□□□ -2.09
LHX3Q9UBR4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LHX3Q9UBR4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 RNU4-24P-201ENST00000364565 139 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 U3.13-201ENST00000364804 214 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 MIR29B2-201ENST00000385055 81 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 SNORD37.1-201ENST00000390968 65 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AL606923.1-201ENST00000406616 190 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AL121890.1-201ENST00000435457 205 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC107401.1-201ENST00000503426 685 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC105313.1-201ENST00000509121 353 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC022880.1-201ENST00000534017 973 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC103987.3-201ENST00000582071 292 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC009314.1-201ENST00000603871 304 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 APOOP1-201ENST00000604695 592 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 ELOCP5-201ENST00000604924 333 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC017083.3-201ENST00000609955 700 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 MIR6895-201ENST00000613497 78 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 uc_338.34-201ENST00000617467 174 ntBASIC2.01□□□□□ -2.09
LHX3Q9UBR4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LHX3Q9UBR4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
LHX3Q9UBR4 RNU6-428P-201ENST00000362942 107 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 RNU6-293P-201ENST00000411259 106 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2□□□□□ -2.09
LHX3Q9UBR4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2□□□□□ -2.09
LHX3Q9UBR4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2□□□□□ -2.09
LHX3Q9UBR4 AC243964.1-201ENST00000441814 261 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2□□□□□ -2.09
LHX3Q9UBR4 AC013470.1-201ENST00000453438 462 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AL353752.1-201ENST00000454946 260 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 snoU13.15-201ENST00000459407 104 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 SRRM1P2-201ENST00000464531 1192 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2□□□□□ -2.09
LHX3Q9UBR4 CCDC34P1-201ENST00000507441 517 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2□□□□□ -2.09
LHX3Q9UBR4 SNORA40.12-201ENST00000516329 111 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 RN7SKP256-201ENST00000517201 314 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2□□□□□ -2.09
LHX3Q9UBR4 AC034114.1-201ENST00000520293 285 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2□□□□□ -2.09
LHX3Q9UBR4 AC115990.1-201ENST00000526957 301 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2□□□□□ -2.09
LHX3Q9UBR4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2□□□□□ -2.09
LHX3Q9UBR4 BNIP3P16-201ENST00000589779 534 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 AC124864.2-201ENST00000624736 186 ntBASIC2□□□□□ -2.09
LHX3Q9UBR4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2□□□□□ -2.09
LHX3Q9UBR4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 RNU6-336P-201ENST00000364891 107 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 Y_RNA.517-201ENST00000384551 106 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 MTCO3P40-201ENST00000392516 676 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 CALM2P3-201ENST00000400429 449 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 RN7SKP284-201ENST00000411002 343 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 USP9YP18-201ENST00000425912 695 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 VN1R108P-201ENST00000431580 830 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AL121601.2-201ENST00000438019 707 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AC010095.1-201ENST00000443543 144 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AL031274.1-201ENST00000450334 232 ntBASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.99□□□□□ -2.09
LHX3Q9UBR4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms