Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP001893.2-201ENST00000526949 202 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AP005435.4-201ENST00000529514 284 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AK6P1-201ENST00000540219 478 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC023050.3-201ENST00000541142 333 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC015712.3-201ENST00000559380 164 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 MIR4769-201ENST00000584126 77 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC008752.3-201ENST00000588113 712 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC011494.1-201ENST00000596454 237 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AL136363.2-201ENST00000604173 851 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AP001596.2-201ENST00000608410 312 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC009509.4-201ENST00000619202 509 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC009487.4-201ENST00000624969 3585 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.40-201ENST00000362645 93 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 RNU6-552P-201ENST00000362869 119 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 RNU1-23P-201ENST00000363361 144 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.359-201ENST00000365498 102 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 SNORA16.2-201ENST00000390991 127 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 RNU6-903P-201ENST00000391270 109 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 GPM6BP3-201ENST00000442797 145 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 HMGN2P23-201ENST00000456759 269 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 HMGB1P29-201ENST00000505659 499 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 RNU6-237P-201ENST00000515985 71 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AL137161.1-201ENST00000532231 390 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 MTATP6P3-201ENST00000581686 676 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC091805.2-201ENST00000603848 235 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC025754.2-201ENST00000606491 432 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 Z82243.1-201ENST00000609432 473 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC007684.1-201ENST00000609671 477 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AL159153.1-201ENST00000619688 317 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AC098657.3-201ENST00000620434 263 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 AL359851.1-201ENST00000569460 4997 ntBASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLCF1Q9UBD9 RNU6-105P-201ENST00000363909 104 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 RNU6-996P-201ENST00000365438 107 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1042P-201ENST00000384204 107 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1222P-201ENST00000384615 107 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 MIR29B2-201ENST00000385055 81 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.582-201ENST00000391023 95 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 SNORD56-201ENST00000413522 71 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AL356379.1-201ENST00000414105 126 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 EIF1AXP1-201ENST00000419267 435 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 RPL30P1-201ENST00000488676 339 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC018868.1-201ENST00000491307 315 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 RNA5SP137-201ENST00000516833 135 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 RN7SKP256-201ENST00000517201 314 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC034114.1-201ENST00000520293 285 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 HIF1AP1-201ENST00000553642 175 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 MTCO3P23-201ENST00000561363 289 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AGGF1P4-201ENST00000568249 801 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AC091135.1-201ENST00000585943 307 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 AL391646.1-201ENST00000603860 190 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 ELOCP5-201ENST00000604924 333 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.68□□□□□ -2.14
CLCF1Q9UBD9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.1-201ENST00000352915 104 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.399-201ENST00000383955 105 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 SNORD116-1-201ENST00000384335 95 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1274P-201ENST00000384557 107 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 MIR544A-201ENST00000384855 91 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 DEFB108C-201ENST00000400154 252 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 RNU2-40P-201ENST00000410833 196 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 USP9YP18-201ENST00000425912 695 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 MTCO2P19-201ENST00000427513 598 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 MTND2P33-201ENST00000506452 1031 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC108078.1-201ENST00000508073 725 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 SNORA31.25-201ENST00000517242 134 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC069113.1-201ENST00000517763 267 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC115990.1-201ENST00000526957 301 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 NDUFA5P6-201ENST00000542110 379 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC026271.5-201ENST00000577873 130 ntBASIC1.67□□□□□ -2.14
CLCF1Q9UBD9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms