Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTN3Q9P232 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTN3Q9P232 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTN3Q9P232 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC135776.4-201ENST00000624300 1904 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNTN3Q9P232 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNTN3Q9P232 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTN3Q9P232 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 CYCSP19-201ENST00000411715 316 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 AC010095.1-201ENST00000443543 144 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 RPL26P9-201ENST00000457466 433 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTN3Q9P232 MRPS18CP4-201ENST00000535821 231 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 AC011602.1-201ENST00000546484 331 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 RPL21P9-201ENST00000556149 474 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 AC021739.1-201ENST00000559631 174 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 MIR548AI-201ENST00000579940 88 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 AL773545.4-201ENST00000637262 310 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 AL513478.4-201ENST00000641636 310 ntBASIC4.26□□□□□ -1.73
CNTN3Q9P232 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTN3Q9P232 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CNTN3Q9P232 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CNTN3Q9P232 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CNTN3Q9P232 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CNTN3Q9P232 RNU6-873P-201ENST00000363833 107 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 SNORA72.2-201ENST00000365028 127 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 SNORD6-201ENST00000365444 73 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 SNORA36A-201ENST00000384221 132 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 MIR487A-201ENST00000385009 80 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 RPL39P29-201ENST00000447779 157 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 UQCRBP2-201ENST00000447827 297 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 MRPS10P1-201ENST00000448483 130 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 RPL32P34-201ENST00000486380 400 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 RNU5F-8P-201ENST00000515941 111 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 RNU7-200P-201ENST00000516105 62 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 AC115990.1-201ENST00000526957 301 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 AC034105.4-201ENST00000568304 277 ntBASIC4.25□□□□□ -1.73
CNTN3Q9P232 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNTN3Q9P232 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CNTN3Q9P232 ADAM3A-203ENST00000461344 2157 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 AC110491.1-201ENST00000562191 2010 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.24□□□□□ -1.73
CNTN3Q9P232 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CNTN3Q9P232 RNU6-1285P-201ENST00000363480 105 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 Y_RNA.179-201ENST00000363844 90 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 RNU6-704P-201ENST00000364162 103 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 RN7SKP202-201ENST00000410439 330 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 RNU6-394P-201ENST00000410735 107 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 AC007215.1-201ENST00000464893 276 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 RPL30P14-201ENST00000482744 348 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 RN7SL323P-201ENST00000494712 295 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.24□□□□□ -1.73
CNTN3Q9P232 CYCSP30-201ENST00000546447 172 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 AL360157.1-201ENST00000565962 87 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNTN3Q9P232 AL356575.1-201ENST00000603008 283 ntBASIC4.24□□□□□ -1.73
CNTN3Q9P232 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.24□□□□□ -1.73
CNTN3Q9P232 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CNTN3Q9P232 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CNTN3Q9P232 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNTN3Q9P232 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNTN3Q9P232 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNTN3Q9P232 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 ZNF204P-201ENST00000416749 2397 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 Y_RNA.217-201ENST00000364214 105 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 Y_RNA.262-201ENST00000364641 102 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 RNA5SP97-201ENST00000365006 84 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 Y_RNA.304-201ENST00000365011 112 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 RNU6-245P-201ENST00000384020 107 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 RNU6-1310P-201ENST00000384153 107 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 SNORA40.19-201ENST00000390846 128 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 Y_RNA.597-201ENST00000410463 100 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 RN7SKP51-201ENST00000410781 304 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 BPY2DP-201ENST00000422208 265 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 HMGB1P37-201ENST00000439613 609 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.23□□□□□ -1.73
CNTN3Q9P232 AP000705.1-201ENST00000454567 350 ntBASIC4.23□□□□□ -1.73
CNTN3Q9P232 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms