Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 MIR1248-201ENST00000629190 106 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 MTND5P17-201ENST00000418405 1603 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 RNU6-743P-201ENST00000364151 106 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 RNY4P34-201ENST00000364779 95 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 RNU6-297P-201ENST00000384636 107 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 RPS3AP3-201ENST00000411933 242 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC073614.1-201ENST00000438690 650 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 SNRPFP4-201ENST00000456366 242 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC009646.1-201ENST00000510455 318 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC137800.2-201ENST00000574375 120 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 BNIP3P8-201ENST00000597863 560 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC090578.1-201ENST00000604955 591 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC008250.2-201ENST00000615261 205 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 Z69720.2-201ENST00000624755 279 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 U4.7-201ENST00000638126 106 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.63□□□□□ -2.15
KLHL28Q9NXS3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU6-527P-201ENST00000363425 104 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU6-116P-201ENST00000384042 109 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 MIR544A-201ENST00000384855 91 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 HMGN1P14-201ENST00000412459 517 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC092447.3-201ENST00000426027 686 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RPS27AP8-201ENST00000452665 445 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC027575.1-201ENST00000481064 460 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC074344.1-201ENST00000512823 224 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC087883.1-201ENST00000551882 391 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 NIFKP6-201ENST00000598115 845 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
KLHL28Q9NXS3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 SNORA62.1-201ENST00000364287 154 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 RNU6-45P-201ENST00000384471 107 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 SNORA40.3-201ENST00000390964 122 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AL590556.1-201ENST00000423231 483 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 ISCA1P6-201ENST00000427740 390 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 RPS6P15-201ENST00000431996 751 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AC009961.2-201ENST00000435771 251 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 SNRPGP9-201ENST00000456025 225 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 FAM206BP-201ENST00000510179 541 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AC104136.1-201ENST00000512969 394 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 AP000942.3-201ENST00000603702 160 ntBASIC1.61□□□□□ -2.15
KLHL28Q9NXS3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 U3.4-201ENST00000363352 213 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 RNU6-105P-201ENST00000363909 104 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AL627390.1-201ENST00000396055 340 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 MIR1294-201ENST00000408503 142 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AL645568.3-201ENST00000433683 316 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AL031667.1-201ENST00000440222 725 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 RNU6-410P-201ENST00000517006 107 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC115990.1-201ENST00000526957 301 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms