Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.16-201ENST00000362421 102 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.352-201ENST00000365439 102 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 BTF3L4P2-201ENST00000392798 346 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 MRPL35P1-201ENST00000404272 572 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AL031121.1-201ENST00000406553 254 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 RNU2-20P-201ENST00000410425 191 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 RNU5B-3P-201ENST00000516601 115 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 RNU6-1282P-201ENST00000516735 96 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AC010186.2-204ENST00000537668 439 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AC137590.2-201ENST00000619709 240 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AC027309.3-201ENST00000623419 351 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 SCARNA4-202ENST00000625402 129 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 FAM35DP-201ENST00000323387 2712 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.277-201ENST00000364754 102 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 AL079342.1-201ENST00000401460 267 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 BX679664.1-201ENST00000434429 253 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 AC006028.1-201ENST00000438379 402 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 Z82210.1-201ENST00000440037 231 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 SSXP4-201ENST00000451349 245 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 RNU6-1338P-201ENST00000516328 91 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.700-201ENST00000516806 100 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 RN7SKP272-201ENST00000516988 232 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 MIR2355-201ENST00000517199 87 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 MRPS36P4-201ENST00000534436 298 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 AC023824.2-201ENST00000566185 400 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 MIR4782-201ENST00000577987 79 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.772-201ENST00000606692 102 ntBASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PDLIM7Q9NR12 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC233981.2-201ENST00000611524 1614 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 SNORD81.1-201ENST00000363064 77 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 RNU6-105P-201ENST00000363909 104 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 RNU6-280P-201ENST00000364145 104 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.274-201ENST00000364714 101 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.555-201ENST00000384673 110 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 MIR325-201ENST00000385260 98 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 MIR548M-201ENST00000408260 86 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 RNA5SP31-201ENST00000411144 127 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AP000275.1-201ENST00000411943 390 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AL358453.1-201ENST00000422522 250 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 RPL30P14-201ENST00000482744 348 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC097462.2-201ENST00000504623 481 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC022868.1-201ENST00000517767 391 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC090617.3-201ENST00000573670 475 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC010928.2-201ENST00000588017 287 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC025946.2-201ENST00000603398 234 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC011476.5-201ENST00000615594 130 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC240442.1-201ENST00000616055 283 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC068831.7-201ENST00000616954 363 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC006111.3-201ENST00000622137 383 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC097372.5-201ENST00000623665 376 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AC009541.1-201ENST00000438279 2662 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 AL365361.1-201ENST00000566942 3481 ntBASIC3.85□□□□□ -1.79
PDLIM7Q9NR12 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 AC007256.1-201ENST00000392253 2765 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RNU6-222P-201ENST00000362438 107 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.29-201ENST00000362570 113 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RNU6-527P-201ENST00000363425 104 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RNY1-201ENST00000364228 113 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.297-201ENST00000364950 91 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RNU4-9P-201ENST00000364951 139 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.541-201ENST00000384640 113 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 SNORD58.1-201ENST00000391313 66 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.602-201ENST00000410535 92 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 284.9 ms