Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RPS29P20-201ENST00000489592 171 ntBASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 RPL23AP54-201ENST00000495129 419 ntBASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 MIR4480-201ENST00000582492 71 ntBASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 AC091953.3-201ENST00000623220 236 ntBASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.55□□□□□ -1.68
PRDM9Q9NQV7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 A2MP1-204ENST00000566278 4130 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 Y_RNA.85-201ENST00000363014 111 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNU6-271P-201ENST00000363858 105 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNU6-309P-201ENST00000364573 106 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNU6-756P-201ENST00000383997 107 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNA5SP87-201ENST00000384155 118 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 SNORD116-13-201ENST00000384408 92 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNU6-748P-201ENST00000384648 107 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 AL161651.1-201ENST00000440882 223 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 HMGN2P21-201ENST00000447764 270 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RN7SKP46-201ENST00000515942 234 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNU6-762P-201ENST00000517107 102 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RNU1-104P-201ENST00000517280 175 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 IGKV1-32-201ENST00000519290 311 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 MIR5699-201ENST00000578903 90 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 AC022726.1-201ENST00000587475 207 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 AC005972.2-201ENST00000604690 348 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 AL391358.1-201ENST00000605342 190 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 FAM27B-201ENST00000610601 213 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 AL022401.1-201ENST00000619498 108 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 MIR3199-2-201ENST00000636243 86 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 Z73965.1-201ENST00000623412 2297 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 MAPK10-320ENST00000641462 6696 ntBASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PRDM9Q9NQV7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 Y_RNA.163-201ENST00000363702 113 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 DYNLT3P1-201ENST00000378574 347 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 SNORA26-201ENST00000391286 122 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 U3.30-201ENST00000391308 210 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 AL645608.4-201ENST00000423619 154 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 MTATP6P21-201ENST00000440681 189 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 SCARNA22-201ENST00000503991 125 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 AC091042.1-201ENST00000579213 173 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 RPS15AP11-201ENST00000594193 385 ntBASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRDM9Q9NQV7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
PRDM9Q9NQV7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.53□□□□□ -1.69
PRDM9Q9NQV7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AC007256.1-201ENST00000392253 2765 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AC107068.1-201ENST00000563286 4218 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AC079741.1-201ENST00000321498 212 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 RNA5SP191-201ENST00000362585 102 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 SNORA72-201ENST00000384339 132 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 MIR1302-5-201ENST00000408164 150 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 MIR1185-2-201ENST00000408687 86 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 RN7SKP100-201ENST00000411258 284 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AL135786.1-201ENST00000415892 214 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 EDDM3CP-201ENST00000415977 425 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 HMGN2P20-201ENST00000437531 273 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 RPS3P1-201ENST00000456781 192 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 RPS26P55-201ENST00000471178 356 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AC145146.1-201ENST00000496370 254 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 SNORD19.2-201ENST00000516978 73 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AP001880.2-201ENST00000538233 448 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 RN7SL52P-201ENST00000584271 284 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AC024220.1-201ENST00000603675 484 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AL022345.2-201ENST00000606307 135 ntBASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRDM9Q9NQV7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms