Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 AC243964.1-201ENST00000441814 261 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AK3P2-201ENST00000507976 429 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-189P-201ENST00000516120 101 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC109479.2-201ENST00000517842 174 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC109329.1-201ENST00000518744 317 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC016957.1-201ENST00000534895 309 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AL590808.1-201ENST00000618696 141 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 MIR6873-201ENST00000622788 63 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC007792.1-201ENST00000623023 402 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC009487.4-201ENST00000624969 3585 ntBASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
EXOSC3Q9NQT5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 MIR449A-201ENST00000362113 91 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 RNU1-23P-201ENST00000363361 144 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-1090P-201ENST00000364065 94 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 RNU1-52P-201ENST00000384190 164 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-1245P-201ENST00000411130 106 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 TIMM9P3-201ENST00000428659 274 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 CYP2C59P-201ENST00000457790 269 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 UBE2DNL-203ENST00000474922 222 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 SNORA14.1-201ENST00000516113 141 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-720P-201ENST00000516363 108 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 SNORD53-201ENST00000579969 78 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AC092807.2-201ENST00000609367 243 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AL121757.2-201ENST00000611223 313 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 AC241585.2-209ENST00000638217 143 ntBASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
EXOSC3Q9NQT5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC002543.1-201ENST00000299783 1954 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 snoU2_19.1-201ENST00000362361 80 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 RNA5SP240-201ENST00000365355 128 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-1274P-201ENST00000384557 107 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 Y_RNA.554-201ENST00000384672 102 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC013470.1-201ENST00000453438 462 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AL353752.1-201ENST00000454946 260 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC079140.5-201ENST00000507882 310 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 Y_RNA.655-201ENST00000515919 96 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 RNU6-586P-201ENST00000517265 104 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 CYCSP27-201ENST00000527643 293 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 MIR3941-201ENST00000582572 103 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC091135.1-201ENST00000585943 307 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AC004492.1-201ENST00000607036 742 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 AL159153.1-201ENST00000619688 317 ntBASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
EXOSC3Q9NQT5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 Y_RNA.38-201ENST00000362617 102 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 SNORA3A-201ENST00000364113 130 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RNU1-148P-201ENST00000384472 162 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 Y_RNA.516-201ENST00000384541 124 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 MIR95-201ENST00000385072 81 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-908P-201ENST00000410160 94 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RN7SKP158-201ENST00000410453 326 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 SEPT14P3-201ENST00000439401 183 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AL732372.2-207ENST00000445840 183 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 SEPT14P2-201ENST00000453405 183 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AL139109.1-201ENST00000455491 297 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RNU7-138P-201ENST00000459479 64 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AC091435.1-201ENST00000505442 584 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AC010486.1-201ENST00000511793 424 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RPL39P5-202ENST00000512505 151 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 SEPT14P4-201ENST00000513445 186 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-323P-201ENST00000521915 107 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 FO082796.1-201ENST00000523795 183 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AC025423.5-201ENST00000550230 219 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 MIR4435-1-201ENST00000582552 80 ntBASIC1.9□□□□□ -2.11
EXOSC3Q9NQT5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms