Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSU72Q9NP77 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 RBBP8P1-201ENST00000449447 1844 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 RNA5SP443-201ENST00000363083 132 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 SNORA11B-201ENST00000408175 129 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 AC099548.1-201ENST00000421443 426 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 RAB28P5-201ENST00000427490 651 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 RPS29P31-201ENST00000446147 164 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 AC091179.3-201ENST00000474761 144 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 AP005660.1-201ENST00000522972 293 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 YPEL5P3-201ENST00000547227 352 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 MIR4436B2-201ENST00000581415 91 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 MIR4436B1-201ENST00000583272 91 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 MIR6868-201ENST00000611215 58 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 RNVU1-4-201ENST00000612985 164 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.87□□□□□ -1.79
SSU72Q9NP77 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSU72Q9NP77 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSU72Q9NP77 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSU72Q9NP77 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SSU72Q9NP77 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSU72Q9NP77 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSU72Q9NP77 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSU72Q9NP77 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSU72Q9NP77 SNORA31-201ENST00000362607 130 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 Y_RNA.179-201ENST00000363844 90 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 RNVU1-6-201ENST00000364688 164 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 Y_RNA.272-201ENST00000364696 102 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 RNA5SP366-201ENST00000365454 123 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 RNU6-1081P-201ENST00000384537 107 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AL357139.1-201ENST00000407792 426 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 RNA5SP390-201ENST00000410191 113 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AC016397.1-201ENST00000412463 242 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 DNAJC19P7-201ENST00000428811 344 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 NDUFS5P3-201ENST00000450668 321 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AL121594.1-201ENST00000475906 575 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 MIR4443-201ENST00000585052 53 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 DEFB117-201ENST00000602356 141 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 AL110115.1-201ENST00000614396 364 ntBASIC3.86□□□□□ -1.79
SSU72Q9NP77 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.86□□□□□ -1.79
SSU72Q9NP77 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSU72Q9NP77 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSU72Q9NP77 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSU72Q9NP77 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSU72Q9NP77 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 RNU1-64P-201ENST00000365443 163 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 Y_RNA.571-201ENST00000384753 98 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSU72Q9NP77 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC090525.1-201ENST00000479116 478 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 RNA5SP468-201ENST00000516782 93 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 ACA59.2-201ENST00000517061 156 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC006199.1-201ENST00000548728 219 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 MIR4738-201ENST00000579134 87 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 MFSD8-216ENST00000641147 4009 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SSU72Q9NP77 AC058791.1-201ENST00000608412 3198 ntBASIC3.85□□□□□ -1.79
SSU72Q9NP77 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
SSU72Q9NP77 RNU6-1272P-201ENST00000362776 107 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 RNU6-283P-201ENST00000364788 107 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 RNU6-818P-201ENST00000364837 108 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 RNU6-487P-201ENST00000365430 104 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 Y_RNA.498-201ENST00000384460 102 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 RNU6-131P-201ENST00000391144 107 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 AC019205.3-201ENST00000424573 156 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms