Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 TRAV32-201ENST00000553993 340 ntBASIC4.28□□□□□ -1.72
CWC22Q9HCG8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.28□□□□□ -1.72
CWC22Q9HCG8 AP001282.2-201ENST00000616149 309 ntBASIC4.28□□□□□ -1.72
CWC22Q9HCG8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CWC22Q9HCG8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.28□□□□□ -1.72
CWC22Q9HCG8 MFSD8-236ENST00000641509 4050 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.180-201ENST00000363867 113 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 RNU6-280P-201ENST00000364145 104 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.274-201ENST00000364714 101 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 MIR215-201ENST00000384858 110 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 RPEP5-201ENST00000441137 268 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 HMGB3P8-201ENST00000449709 577 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AC091179.1-201ENST00000461606 579 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 NDUFB9P3-201ENST00000521269 501 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 AL121917.1-203ENST00000605534 577 ntBASIC4.27□□□□□ -1.73
CWC22Q9HCG8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CWC22Q9HCG8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.26□□□□□ -1.73
CWC22Q9HCG8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.65-201ENST00000362846 100 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.84-201ENST00000363011 104 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.270-201ENST00000364693 104 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 RNU6-933P-201ENST00000384424 107 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 MIR634-201ENST00000385208 97 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 SNORA40C-201ENST00000391285 128 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AL513475.1-201ENST00000406602 315 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 MIR548H3-201ENST00000408771 118 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 MIR1289-1-201ENST00000408836 144 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 MTCO3P19-201ENST00000415864 321 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 CYCSP32-201ENST00000440548 321 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AL392103.1-201ENST00000447000 198 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 NDUFB1P2-201ENST00000449477 176 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 BX510359.1-201ENST00000456973 237 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AC093663.1-201ENST00000497190 394 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AC034114.1-201ENST00000520293 285 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.26□□□□□ -1.73
CWC22Q9HCG8 CPDP1-201ENST00000579660 283 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AL355877.2-201ENST00000603670 358 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AC006077.1-201ENST00000604746 343 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 MIR7851-201ENST00000610611 160 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AC004792.1-201ENST00000614523 137 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 AC022149.2-201ENST00000621061 203 ntBASIC4.26□□□□□ -1.73
CWC22Q9HCG8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CWC22Q9HCG8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 FTLP6-201ENST00000355274 422 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 MIR412-201ENST00000362142 91 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.29-201ENST00000362570 113 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.54-201ENST00000362766 105 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.237-201ENST00000364439 102 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 SNORD14B-201ENST00000364533 90 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.297-201ENST00000364950 91 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 RNU6-611P-201ENST00000384276 104 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 RNU6-1203P-201ENST00000410703 110 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 RNU2-68P-201ENST00000410878 191 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.623-201ENST00000411128 95 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 AP000275.1-201ENST00000411943 390 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 MTATP6P29-201ENST00000415057 132 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 HMGN2P30-201ENST00000423237 256 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 SNRPEP9-201ENST00000436794 238 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 AC004383.1-201ENST00000438135 289 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 RPL21P13-201ENST00000488305 481 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 AC026333.2-201ENST00000542164 106 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 RNU1-30P-201ENST00000606575 163 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 AC110079.1-202ENST00000635213 138 ntBASIC4.25□□□□□ -1.73
CWC22Q9HCG8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.25□□□□□ -1.73
CWC22Q9HCG8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CWC22Q9HCG8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CWC22Q9HCG8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CWC22Q9HCG8 MIR30E-201ENST00000362104 92 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 Y_RNA.183-201ENST00000363882 113 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 RNU6-1317P-201ENST00000364582 104 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 RNA5SP267-201ENST00000364893 126 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 RNU6-187P-201ENST00000384139 106 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 RNU6-166P-201ENST00000384371 107 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 MIR767-201ENST00000390228 109 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CWC22Q9HCG8 SNORA69.1-201ENST00000390904 137 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 NDUFB4P4-201ENST00000404822 243 ntBASIC4.24□□□□□ -1.73
CWC22Q9HCG8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms