Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RNA5SP335-201ENST00000363817 110 ntBASIC8.08□□□□□ -1.12
SENP3Q9H4L4 RNU6-895P-201ENST00000384125 103 ntBASIC8.08□□□□□ -1.12
SENP3Q9H4L4 AC025554.1-201ENST00000505641 188 ntBASIC8.08□□□□□ -1.12
SENP3Q9H4L4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC8.08□□□□□ -1.12
SENP3Q9H4L4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC8.08□□□□□ -1.12
SENP3Q9H4L4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC8.08□□□□□ -1.12
SENP3Q9H4L4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SENP3Q9H4L4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SENP3Q9H4L4 AL136964.1-201ENST00000622038 2990 ntBASIC8.08□□□□□ -1.12
SENP3Q9H4L4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.08□□□□□ -1.12
SENP3Q9H4L4 AC107980.1-201ENST00000558671 3355 ntBASIC8.08□□□□□ -1.12
SENP3Q9H4L4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 RNA5SP183-201ENST00000362452 119 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 RNA5SP479-201ENST00000364858 117 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 RNA5SP30-201ENST00000365552 115 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 RN7SL354P-201ENST00000469282 294 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 UBL5P3-201ENST00000475112 231 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 AC106707.2-201ENST00000484182 374 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 AP002004.2-201ENST00000531656 154 ntBASIC8.07□□□□□ -1.12
SENP3Q9H4L4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SENP3Q9H4L4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.06□□□□□ -1.12
SENP3Q9H4L4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SENP3Q9H4L4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SENP3Q9H4L4 RNU6-208P-201ENST00000362431 107 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 U8.5-201ENST00000364528 136 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 AL139247.1-201ENST00000422768 325 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 RPL7AP28-201ENST00000464513 571 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 AC110768.1-201ENST00000509222 400 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 IGLV3-24-201ENST00000517477 197 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 AC012616.1-201ENST00000600294 197 ntBASIC8.06□□□□□ -1.12
SENP3Q9H4L4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SENP3Q9H4L4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SENP3Q9H4L4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 RNU1-32P-201ENST00000363937 159 ntBASIC8.05□□□□□ -1.12
SENP3Q9H4L4 RNU6-1184P-201ENST00000384588 108 ntBASIC8.05□□□□□ -1.12
SENP3Q9H4L4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 RNU7-85P-201ENST00000458851 63 ntBASIC8.05□□□□□ -1.12
SENP3Q9H4L4 AL110118.1-201ENST00000553543 400 ntBASIC8.05□□□□□ -1.12
SENP3Q9H4L4 SNORD3E-202ENST00000627253 216 ntBASIC8.05□□□□□ -1.12
SENP3Q9H4L4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SENP3Q9H4L4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 AC007656.2-201ENST00000624902 4547 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 AC144833.1-201ENST00000567953 4089 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 RNA5SP307-201ENST00000362863 116 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 RNU6-681P-201ENST00000364012 104 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 RN7SL570P-201ENST00000484405 292 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 AC134698.5-201ENST00000519444 336 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 AC067852.5-201ENST00000589299 310 ntBASIC8.04□□□□□ -1.12
SENP3Q9H4L4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SENP3Q9H4L4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 MIR130A-201ENST00000385274 89 ntBASIC8.03□□□□□ -1.12
SENP3Q9H4L4 RPS16P5-201ENST00000406501 404 ntBASIC8.03□□□□□ -1.12
SENP3Q9H4L4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SENP3Q9H4L4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.02□□□□□ -1.12
SENP3Q9H4L4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
SENP3Q9H4L4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 283.5 ms