Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BHLHE41Q9C0J9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-1130P-201ENST00000365434 107 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AC068538.1-201ENST00000376856 336 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-19P-201ENST00000384718 107 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 U3.22-201ENST00000391120 215 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 CBX3P9-201ENST00000402326 552 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AL441985.1-201ENST00000457727 251 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AC025554.1-201ENST00000505641 188 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AC009127.3-201ENST00000570531 403 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 MIR4715-201ENST00000584117 79 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 AL034555.1-201ENST00000604816 211 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 FAM27D1-201ENST00000612308 341 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 Z82217.1-201ENST00000625157 8149 ntBASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BHLHE41Q9C0J9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU1-14P-201ENST00000362759 152 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.329-201ENST00000365209 107 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU4-17P-201ENST00000365598 141 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-449P-201ENST00000383914 107 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU6-1117P-201ENST00000384525 104 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 AL133475.1-201ENST00000404414 305 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU2-2P-201ENST00000410396 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 AC027176.1-201ENST00000560204 514 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU2-4P-201ENST00000606190 192 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.15-201ENST00000611544 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.16-201ENST00000613119 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.12-201ENST00000613778 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 AC005520.5-201ENST00000613926 164 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.9-201ENST00000615427 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.11-201ENST00000616345 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.2-201ENST00000616535 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.3-201ENST00000617785 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.19-201ENST00000618602 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 RNU2-1-201ENST00000618664 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.6-201ENST00000619225 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.5-201ENST00000619465 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 U2.10-201ENST00000620268 191 ntBASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHE41Q9C0J9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.357-201ENST00000365487 109 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 Y_RNA.580-201ENST00000391004 95 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AC096649.2-201ENST00000416186 393 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 CYCSP48-201ENST00000417124 323 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AP002001.1-203ENST00000534002 267 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AC011471.1-201ENST00000585766 187 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AL356218.2-201ENST00000605264 187 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AC023043.4-201ENST00000612081 449 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 AC091895.1-201ENST00000624494 256 ntBASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHE41Q9C0J9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
BHLHE41Q9C0J9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.96□□□□□ -1.77
BHLHE41Q9C0J9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
BHLHE41Q9C0J9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
BHLHE41Q9C0J9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHE41Q9C0J9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHE41Q9C0J9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHE41Q9C0J9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHE41Q9C0J9 Y_RNA.182-201ENST00000363880 111 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms