Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-428P-201ENST00000362942 107 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 Y_RNA.541-201ENST00000384640 113 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AL079342.1-201ENST00000401460 267 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 COX6CP10-201ENST00000416832 224 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 MTCO1P5-201ENST00000433573 344 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 RPS4XP2-201ENST00000458402 793 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AC092798.1-201ENST00000458542 409 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-496P-201ENST00000516145 99 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 MTND5P41-201ENST00000517498 206 ntBASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.17□□□□□ -1.74
CNTNAP4Q9C0A0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 AC007390.2-201ENST00000606229 3803 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 SNORD113-8-201ENST00000363497 74 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-290P-201ENST00000365212 101 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 SNORD50.2-201ENST00000365465 70 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RNU2-68P-201ENST00000410878 191 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 AC079780.1-201ENST00000428259 207 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 AC008885.1-201ENST00000514930 301 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RNU7-200P-201ENST00000516105 62 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-1278P-201ENST00000516130 107 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-861P-201ENST00000516745 106 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 SNORA31.18-201ENST00000517043 134 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 MED28P6-201ENST00000558776 231 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 MIR4659A-201ENST00000580269 81 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 MIR2682-201ENST00000580305 110 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RPL12P50-201ENST00000603116 116 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 Z83818.1-201ENST00000603584 150 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 RMST_6.1-201ENST00000611980 203 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 SCARNA4-201ENST00000629045 128 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP4Q9C0A0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CNTNAP4Q9C0A0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.15□□□□□ -1.74
CNTNAP4Q9C0A0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 Y_RNA.16-201ENST00000362421 102 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-1301P-201ENST00000362724 104 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 Y_RNA.122-201ENST00000363331 96 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 SNORD115-32-201ENST00000364079 82 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-335P-201ENST00000364563 113 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-336P-201ENST00000364891 107 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNA5SP126-201ENST00000365092 109 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-326P-201ENST00000365480 107 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-629P-201ENST00000384061 103 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 SNORA53-201ENST00000391141 249 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU2-51P-201ENST00000410708 197 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNA5SP229-201ENST00000410809 99 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 AC007560.1-201ENST00000426912 237 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-572P-201ENST00000516724 80 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 AC022559.1-201ENST00000520905 205 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 MRPS36P4-201ENST00000534436 298 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 AP002392.1-201ENST00000537692 208 ntBASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTNAP4Q9C0A0 AC233981.2-201ENST00000611524 1614 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 SRP72P2-201ENST00000344851 1979 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 ZNF826P-207ENST00000622273 1910 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AC018529.3-201ENST00000624212 2254 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AL365361.1-201ENST00000566942 3481 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AL513302.2-201ENST00000562313 1842 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 MIR411-201ENST00000362239 96 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-17P-201ENST00000384245 107 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 SNORA54-201ENST00000384281 123 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-18P-201ENST00000384527 107 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 EIF1AXP1-201ENST00000419267 435 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AC098614.2-201ENST00000426040 255 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 AC016700.2-201ENST00000446011 156 ntBASIC4.14□□□□□ -1.75
CNTNAP4Q9C0A0 RPL31P13-201ENST00000484151 370 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms