Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-3Q9BYR4 FAM91A3P-201ENST00000456826 2544 ntBASIC1.54□□□□□ -2.16
KRTAP4-3Q9BYR4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-3Q9BYR4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 NEAT1-202ENST00000501122 22743 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SPATA31D2P-201ENST00000429999 4388 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MIR372-201ENST00000362225 67 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU6-161P-201ENST00000363051 106 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNORD115-19-201ENST00000363098 82 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNORD115-18-201ENST00000363293 82 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU6-873P-201ENST00000363833 107 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNA5SP28-201ENST00000363841 119 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNORD115-30-201ENST00000364117 82 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU1-132P-201ENST00000364300 164 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNORA70.2-201ENST00000364506 135 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNORD115-17-201ENST00000364612 82 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNORD115-38-201ENST00000365037 82 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU6-921P-201ENST00000384361 107 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MIR635-201ENST00000384830 98 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RPS20P14-201ENST00000412545 360 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AL157831.1-201ENST00000426134 473 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC005300.1-201ENST00000428401 373 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RPS29P17-201ENST00000430795 166 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC243964.1-201ENST00000441814 261 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU7-164P-201ENST00000459221 62 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AL133162.1-201ENST00000463228 453 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 PPIAP21-201ENST00000464473 501 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC091167.1-201ENST00000492017 396 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC135721.1-201ENST00000497954 479 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC234781.5-201ENST00000508429 271 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNA5SP464-201ENST00000516251 108 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU6-964P-201ENST00000516524 69 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNU7-181P-201ENST00000517234 74 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SLC2A3P1-201ENST00000519666 1451 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC107918.3-201ENST00000533272 382 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MIR4284-201ENST00000578924 81 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MIR466-201ENST00000580653 84 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 MIR3129-201ENST00000581095 76 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AL049861.1-201ENST00000603130 150 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC123786.2-201ENST00000603459 275 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AL139395.1-201ENST00000603662 160 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SNX18P1Y-201ENST00000616231 511 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC110801.1-201ENST00000623590 212 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC064859.1-201ENST00000624741 174 ntBASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-3Q9BYR4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 AC093591.2-201ENST00000565254 3843 ntBASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 AL022322.2-201ENST00000624072 20397 ntBASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
KRTAP4-3Q9BYR4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC026241.1-201ENST00000517873 2142 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms