Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC019226.1-201ENST00000625666 515 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 SGO1P1-201ENST00000603525 1447 ntBASIC0.09□□□□□ -2.39
ABCA3Q99758 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
ABCA3Q99758 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 RNU6-891P-201ENST00000384280 111 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 GPM6BP2-201ENST00000432046 144 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 AC092170.1-201ENST00000440211 356 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA3Q99758 GPM6BP1-201ENST00000446387 144 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.09□□□□□ -2.4
ABCA3Q99758 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA3Q99758 MIR4782-201ENST00000577987 79 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 AC106858.1-201ENST00000637497 429 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 LINC02555-201ENST00000563933 1951 ntBASIC0.09□□□□□ -2.4
ABCA3Q99758 MIR101-1-201ENST00000362265 75 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 RNU6-743P-201ENST00000364151 106 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 MIR604-201ENST00000384880 94 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 Y_RNA.610-201ENST00000410681 103 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 MTND1P21-201ENST00000412991 285 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA3Q99758 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
ABCA3Q99758 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA3Q99758 RNU6-165P-201ENST00000517170 99 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
ABCA3Q99758 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.08□□□□□ -2.4
ABCA3Q99758 AC040896.1-201ENST00000613819 479 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 AC018926.1-201ENST00000616335 435 ntBASIC0.08□□□□□ -2.4
ABCA3Q99758 RNU6-223P-201ENST00000362830 107 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 RNU6-1210P-201ENST00000363775 107 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 RNU6-1019P-201ENST00000364424 107 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
ABCA3Q99758 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.07□□□□□ -2.4
ABCA3Q99758 BRK1P2-201ENST00000442875 223 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AC048334.1-201ENST00000477975 159 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.07□□□□□ -2.4
ABCA3Q99758 SNORD79.1-201ENST00000516069 84 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AC104417.1-201ENST00000523974 751 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.07□□□□□ -2.4
ABCA3Q99758 AC137800.2-201ENST00000574375 120 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 RSL24D1P11-201ENST00000591045 491 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AL355598.1-201ENST00000604169 202 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AL353765.1-201ENST00000605514 183 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.07□□□□□ -2.4
ABCA3Q99758 RNU6-619P-201ENST00000365146 108 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 RNU6-1176P-201ENST00000390955 107 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 SNORD99-201ENST00000408612 74 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 RPS3AP1-201ENST00000413190 320 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 MTCO3P1-205ENST00000422088 832 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.07□□□□□ -2.4
ABCA3Q99758 AC002429.1-201ENST00000437672 148 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.07□□□□□ -2.4
ABCA3Q99758 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.07□□□□□ -2.4
ABCA3Q99758 LARP7P2-201ENST00000575306 125 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AC025627.3-201ENST00000582078 182 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 AC080188.3-201ENST00000624842 748 ntBASIC0.07□□□□□ -2.4
ABCA3Q99758 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA3Q99758 AC104651.1-201ENST00000427559 735 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 AC093422.3-201ENST00000428506 305 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 snoU13.11-201ENST00000459219 104 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.06□□□□□ -2.4
ABCA3Q99758 RNU6-1183P-201ENST00000517054 60 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA3Q99758 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.06□□□□□ -2.4
ABCA3Q99758 AC090330.1-201ENST00000588646 764 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 AC017083.3-201ENST00000609955 700 ntBASIC0.06□□□□□ -2.4
ABCA3Q99758 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 snoU13.27-201ENST00000459278 104 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 RPS26P45-201ENST00000471748 340 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 AC023194.1-201ENST00000493084 308 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 AC022493.2-201ENST00000506122 481 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 RNA5SP481-201ENST00000516814 122 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 AC016256.1-201ENST00000547971 354 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 AC105148.1-201ENST00000604961 409 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 AL162730.1-201ENST00000605734 292 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 AC097372.5-201ENST00000623665 376 ntBASIC0.05□□□□□ -2.4
ABCA3Q99758 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 MIR16-1-201ENST00000385271 89 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 SNORD12-201ENST00000391002 90 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
ABCA3Q99758 RN7SKP142-201ENST00000411236 328 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 RAB28P5-201ENST00000427490 651 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AC002542.1-201ENST00000440683 193 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 OR6C5P-201ENST00000452388 923 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 IGJP1-201ENST00000522682 475 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.04□□□□□ -2.4
ABCA3Q99758 AC015688.6-201ENST00000577737 104 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AL360219.1-201ENST00000610230 366 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA3Q99758 AC010615.1-201ENST00000594254 1764 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 Y_RNA.572-201ENST00000384757 98 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 RNU1-119P-201ENST00000391122 165 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 MTATP6P27-201ENST00000416987 621 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 MTCO2P12-201ENST00000427426 682 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA3Q99758 AL929288.2-201ENST00000446368 407 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA3Q99758 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms