Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.291-201ENST00000364886 113 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-326P-201ENST00000365480 107 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-318P-201ENST00000384283 103 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 RNU5A-5P-201ENST00000411054 116 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.662-201ENST00000516028 97 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP208-201ENST00000516156 78 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 MIR548AI-201ENST00000579940 88 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AC020914.4-201ENST00000597690 277 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 RPL23AP88-201ENST00000605759 454 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AL133412.1-201ENST00000380194 2992 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AC008568.2-201ENST00000623862 2313 ntBASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
SYNGAP1Q96PV0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU1-140P-201ENST00000365040 165 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-898P-201ENST00000365627 104 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-140P-201ENST00000384566 108 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RPL23AP48-201ENST00000406913 488 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP293-201ENST00000410527 113 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-651P-201ENST00000411040 105 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU2-61P-201ENST00000411069 191 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP31-201ENST00000411144 127 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 EIF1AXP1-201ENST00000419267 435 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 EIF1P2-201ENST00000428233 350 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 WARS2P1-201ENST00000429678 537 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 SNORD108-201ENST00000459332 71 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 AP004607.1-201ENST00000524456 203 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 LINC00933-203ENST00000559812 219 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 H3F3AP1-201ENST00000559984 334 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 AL137849.1-201ENST00000604767 169 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.21□□□□□ -1.73
SYNGAP1Q96PV0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 RNY4P28-201ENST00000365281 93 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 RN7SKP51-201ENST00000410781 304 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 AC091874.1-201ENST00000511402 339 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-1114P-201ENST00000516022 107 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-346P-201ENST00000516288 111 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-1212P-201ENST00000517023 104 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 LARP7P3-201ENST00000579888 337 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 AC004832.4-201ENST00000608952 331 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 AC006001.4-201ENST00000622243 395 ntBASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNGAP1Q96PV0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AL353743.1-202ENST00000431724 1695 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 SNORD56.1-201ENST00000362913 68 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-626P-201ENST00000363354 107 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-923P-201ENST00000364753 107 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-142P-201ENST00000384019 107 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 Y_RNA.418-201ENST00000384029 102 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 RNA5SP424-201ENST00000390988 115 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 Z82210.1-201ENST00000440037 231 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 SSXP4-201ENST00000451349 245 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 RPS29P26-201ENST00000477483 171 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AF186996.7-201ENST00000492781 209 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 HMGB1P22-201ENST00000505315 124 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 Vault.1-201ENST00000516474 102 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-1183P-201ENST00000517054 60 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 UBL5P4-201ENST00000562584 236 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AC072026.1-201ENST00000605023 201 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 YPEL5P2-201ENST00000605553 359 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 AC104465.1-201ENST00000611365 139 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 IGHVIII-44-202ENST00000636235 289 ntBASIC4.2□□□□□ -1.74
SYNGAP1Q96PV0 FAM35DP-201ENST00000323387 2712 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 SNORD9-201ENST00000362566 104 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 SNORD116-20-201ENST00000384529 92 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms