Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNA5SP360-201ENST00000516555 118 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 RNA5SP73-201ENST00000516744 108 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 ZNF192P1-203ENST00000565888 810 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 MTND6P33-201ENST00000571794 183 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 AL355812.1-201ENST00000603215 216 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM47Q96LD4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRIM47Q96LD4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM47Q96LD4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM47Q96LD4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 RNU1-15P-201ENST00000353977 144 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 RNU6-766P-201ENST00000362478 107 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 SNORA29-201ENST00000384183 140 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 MT-TC-201ENST00000387405 66 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 MIR1911-201ENST00000410783 80 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC087588.1-201ENST00000462203 316 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 SNORA31.22-201ENST00000517204 135 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC018448.1-201ENST00000552843 316 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AL592437.2-201ENST00000421655 2434 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 AC007390.2-201ENST00000606229 3803 ntBASIC4.87□□□□□ -1.63
TRIM47Q96LD4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM47Q96LD4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AC016588.2-201ENST00000632484 3021 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 RNU1-108P-201ENST00000362556 161 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 MIR34A-201ENST00000385130 110 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AL512604.1-201ENST00000404812 257 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 PPBPP1-201ENST00000510807 373 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 RNU6-1146P-201ENST00000516282 102 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AC007179.3-201ENST00000604976 235 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AC019176.2-201ENST00000611579 315 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AC012314.7-201ENST00000619693 93 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 MIR6500-201ENST00000622700 86 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AC241585.2-209ENST00000638217 143 ntBASIC4.86□□□□□ -1.63
TRIM47Q96LD4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM47Q96LD4 AL136164.4-201ENST00000625013 2135 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 RNU6-78P-201ENST00000362897 107 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 RNU6-1048P-201ENST00000364054 107 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.328-201ENST00000365208 113 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 RNU6-756P-201ENST00000383997 107 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 SNORA20B-201ENST00000384220 132 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 RPL26P27-201ENST00000414397 437 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AC009963.1-201ENST00000417265 157 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AC092798.1-201ENST00000458542 409 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AC136628.3-201ENST00000521868 290 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 MIR4512-201ENST00000583257 77 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AL138963.2-201ENST00000605137 226 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AC010999.1-201ENST00000611856 324 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 AC138915.1-201ENST00000565427 1685 ntBASIC4.85□□□□□ -1.63
TRIM47Q96LD4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM47Q96LD4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AC010329.5-201ENST00000623497 2174 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 U8.1-201ENST00000362843 134 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 RNU6-1167P-201ENST00000363227 94 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.287-201ENST00000364853 94 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 RNU6-728P-201ENST00000365375 104 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 MIR488-201ENST00000365739 83 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 RNU6-820P-201ENST00000384273 107 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 SNORA51.10-201ENST00000384418 136 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.498-201ENST00000384460 102 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 MIR29B2-201ENST00000385055 81 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AL606845.1-201ENST00000404881 255 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AL135790.2-201ENST00000437701 267 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms